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  5. MA_10437065g0010

MA_10437065g0010


Description : ATP-dependent DNA helicase SRS2-like protein At4g25120 OS=Arabidopsis thaliana (sp|d1kf50|srs2l_arath : 121.0)


Gene families : OG0001612 (Archaeplastida) Phylogenetic Tree(s): OG0001612_tree ,
OG_05_0028182 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026459 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10437065g0010
Cluster HCCA: Cluster_256

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00193850 evm_27.TU.AmTr_v1... ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.02 Archaeplastida
AT4G25120 SRS2, ATSRS2 P-loop containing nucleoside triphosphate hydrolases... 0.08 Archaeplastida
Gb_06418 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.05 Archaeplastida
Gb_06420 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.05 Archaeplastida
Gb_06422 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
MA_44585g0010 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.05 Archaeplastida
Solyc03g093850.2.1 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.03 Archaeplastida
Zm00001e010432_P001 No alias ATP-dependent DNA helicase SRS2-like protein At4g25120... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005664 nuclear origin of replication recognition complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR034739 UvrD/AddA_N 405 517
No external refs found!