1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_10437250g0010

MA_10437250g0010


Description : Probable helicase CHR10 OS=Arabidopsis thaliana (sp|f4iv45|chr10_arath : 546.0)


Gene families : OG0000082 (Archaeplastida) Phylogenetic Tree(s): OG0000082_tree ,
OG_05_0008796 (LandPlants) Phylogenetic Tree(s): OG_05_0008796_tree ,
OG_06_0009569 (SeedPlants) Phylogenetic Tree(s): OG_06_0009569_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10437250g0010
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AT5G19310 No alias Homeotic gene regulator 0.03 Archaeplastida
Cpa|evm.model.tig00000144.188 No alias ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00000691.35 No alias Probable ATP-dependent DNA helicase CHR12 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre03.g158550 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.02 Archaeplastida
Cre07.g325700 No alias ATP-dependent helicase BRM OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre09.g390000 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.02 Archaeplastida
GSVIVT01035901001 No alias Chromatin organisation.chromatin remodeling... 0.02 Archaeplastida
Gb_15026 No alias chromatin remodeling factor (Alc) 0.04 Archaeplastida
MA_102992g0020 No alias Probable chromatin-remodeling complex ATPase chain... 0.03 Archaeplastida
Mp4g12200.1 No alias chromatin remodeling factor (DDM1) 0.06 Archaeplastida
Pp3c18_19045V3.1 No alias chromatin remodeling factor CHD3 (PICKLE) 0.04 Archaeplastida
Pp3c27_3890V3.1 No alias Homeotic gene regulator 0.03 Archaeplastida
Solyc02g062780.4.1 No alias chromatin remodeling factor (DDM1) 0.03 Archaeplastida
Solyc02g085390.4.1 No alias chromatin remodeling factor (DDM1) 0.02 Archaeplastida
Solyc06g054560.3.1 No alias chromatin remodeling factor (Iswi) 0.03 Archaeplastida
Zm00001e005517_P002 No alias chromatin remodeling factor (DDM1) 0.02 Archaeplastida
Zm00001e017643_P001 No alias chromatin remodeling factor (Iswi) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
InterPro domains Description Start Stop
IPR001650 Helicase_C 42 168
No external refs found!