AT5G21150 (AGO9)

Aliases : AGO9

Description : Argonaute family protein

Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0001060 (LandPlants) Phylogenetic Tree(s): OG_05_0001060_tree ,
OG_06_0001214 (SeedPlants) Phylogenetic Tree(s): OG_06_0001214_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G21150
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AT1G31290	AGO3	ARGONAUTE 3	0.05	Archaeplastida
ChrSy.fgenesh.mRNA.6	No alias	no hits & (original description: none)	0.03	Archaeplastida
GSVIVT01012529001	No alias	Protein argonaute 7 OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
GSVIVT01029383001	No alias	Chromatin organisation.DNA methylation.canonical...	0.03	Archaeplastida
LOC_Os06g51310.2	No alias	RIS-Complex miRNA recruiting factor (AGO1)	0.03	Archaeplastida
LOC_Os07g09020.1	No alias	Protein argonaute 14 OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_10428886g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_14457g0010	No alias	Protein argonaute 4A OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_14457g0020	No alias	Protein argonaute 4B OS=Oryza sativa subsp. japonica...	0.02	Archaeplastida
MA_158278g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_159389g0010	No alias	Protein argonaute 7 OS=Arabidopsis thaliana...	0.02	Archaeplastida
Pp3c18_9600V3.1	No alias	Argonaute family protein	0.02	Archaeplastida
Pp3c19_20670V3.1	No alias	Argonaute family protein	0.02	Archaeplastida
Solyc01g010970.3.1	No alias	Protein argonaute 7 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Solyc01g096750.1.1	No alias	siRNA-integrating factor (AGO)	0.02	Archaeplastida
Solyc02g069280.2.1	No alias	siRNA-binding factor (AGO2) of non-canonical RdDM pathway	0.03	Archaeplastida
Zm00001e007233_P001	No alias	RIS-Complex miRNA recruiting factor (AGO1)	0.01	Archaeplastida
Zm00001e010349_P002	No alias	Protein argonaute 18 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e011432_P001	No alias	Protein argonaute MEL1 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e025496_P001	No alias	siRNA-integrating factor (AGO)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0003006	developmental process involved in reproduction	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0010528	regulation of transposition	None	Extended
BP	GO:0010529	negative regulation of transposition	IMP	Interproscan
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0032502	developmental process	None	Extended
MF	GO:0035197	siRNA binding	IDA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0048481	plant ovule development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
MF	GO:0061980	regulatory RNA binding	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0099402	plant organ development	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	Neighborhood
MF	GO:0000217	DNA secondary structure binding	IEP	Neighborhood
CC	GO:0000228	nuclear chromosome	IEP	Neighborhood
MF	GO:0000404	heteroduplex DNA loop binding	IEP	Neighborhood
BP	GO:0000710	meiotic mismatch repair	IEP	Neighborhood
MF	GO:0003774	motor activity	IEP	Neighborhood
MF	GO:0003872	6-phosphofructokinase activity	IEP	Neighborhood
MF	GO:0003983	UTP:glucose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0004609	phosphatidylserine decarboxylase activity	IEP	Neighborhood
CC	GO:0005694	chromosome	IEP	Neighborhood
CC	GO:0005945	6-phosphofructokinase complex	IEP	Neighborhood
BP	GO:0006011	UDP-glucose metabolic process	IEP	Neighborhood
BP	GO:0006259	DNA metabolic process	IEP	Neighborhood
BP	GO:0006304	DNA modification	IEP	Neighborhood
BP	GO:0006305	DNA alkylation	IEP	Neighborhood
BP	GO:0006306	DNA methylation	IEP	Neighborhood
BP	GO:0006323	DNA packaging	IEP	Neighborhood
BP	GO:0006325	chromatin organization	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006379	mRNA cleavage	IEP	Neighborhood
BP	GO:0007129	synapsis	IEP	Neighborhood
CC	GO:0008278	cohesin complex	IEP	Neighborhood
MF	GO:0008443	phosphofructokinase activity	IEP	Neighborhood
BP	GO:0008608	attachment of spindle microtubules to kinetochore	IEP	Neighborhood
BP	GO:0009410	response to xenobiotic stimulus	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009892	negative regulation of metabolic process	IEP	Neighborhood
BP	GO:0010032	meiotic chromosome condensation	IEP	Neighborhood
BP	GO:0010424	DNA methylation on cytosine within a CG sequence	IEP	Neighborhood
MF	GO:0010428	methyl-CpNpG binding	IEP	Neighborhood
MF	GO:0010429	methyl-CpNpN binding	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
MF	GO:0010491	UTP:arabinose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010589	leaf proximal/distal pattern formation	IEP	Neighborhood
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0010629	negative regulation of gene expression	IEP	Neighborhood
BP	GO:0016458	gene silencing	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
MF	GO:0017103	UTP:galactose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0030261	chromosome condensation	IEP	Neighborhood
MF	GO:0030983	mismatched DNA binding	IEP	Neighborhood
BP	GO:0031047	gene silencing by RNA	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
BP	GO:0031935	regulation of chromatin silencing	IEP	Neighborhood
BP	GO:0031937	positive regulation of chromatin silencing	IEP	Neighborhood
MF	GO:0032135	DNA insertion or deletion binding	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
CC	GO:0032300	mismatch repair complex	IEP	Neighborhood
BP	GO:0032776	DNA methylation on cytosine	IEP	Neighborhood
BP	GO:0033356	UDP-L-arabinose metabolic process	IEP	Neighborhood
BP	GO:0035279	mRNA cleavage involved in gene silencing by miRNA	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
BP	GO:0043570	maintenance of DNA repeat elements	IEP	Neighborhood
BP	GO:0044728	DNA methylation or demethylation	IEP	Neighborhood
BP	GO:0045892	negative regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0046398	UDP-glucuronate metabolic process	IEP	Neighborhood
MF	GO:0047268	galactinol-raffinose galactosyltransferase activity	IEP	Neighborhood
MF	GO:0047338	UTP:xylose-1-phosphate uridylyltransferase activity	IEP	Neighborhood
MF	GO:0047350	glucuronate-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0048444	floral organ morphogenesis	IEP	Neighborhood
BP	GO:0048449	floral organ formation	IEP	Neighborhood
BP	GO:0048451	petal formation	IEP	Neighborhood
BP	GO:0048453	sepal formation	IEP	Neighborhood
BP	GO:0051054	positive regulation of DNA metabolic process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051177	meiotic sister chromatid cohesion	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051253	negative regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051276	chromosome organization	IEP	Neighborhood
BP	GO:0051316	attachment of spindle microtubules to kinetochore involved in meiotic chromosome segregation	IEP	Neighborhood
BP	GO:0051455	attachment of spindle microtubules to kinetochore involved in homologous chromosome segregation	IEP	Neighborhood
MF	GO:0051748	UTP-monosaccharide-1-phosphate uridylyltransferase activity	IEP	Neighborhood
BP	GO:0051754	meiotic sister chromatid cohesion, centromeric	IEP	Neighborhood
BP	GO:0052573	UDP-D-galactose metabolic process	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0060968	regulation of gene silencing	IEP	Neighborhood
BP	GO:0070192	chromosome organization involved in meiotic cell cycle	IEP	Neighborhood
MF	GO:0070569	uridylyltransferase activity	IEP	Neighborhood
BP	GO:0070601	centromeric sister chromatid cohesion	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0080188	RNA-directed DNA methylation	IEP	Neighborhood
BP	GO:0090308	regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0090309	positive regulation of methylation-dependent chromatin silencing	IEP	Neighborhood
BP	GO:0090697	post-embryonic plant organ morphogenesis	IEP	Neighborhood
BP	GO:0098795	mRNA cleavage involved in gene silencing	IEP	Neighborhood
MF	GO:1901265	nucleoside phosphate binding	IEP	Neighborhood
BP	GO:1902679	negative regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1903507	negative regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905269	positive regulation of chromatin organization	IEP	Neighborhood
BP	GO:1905393	plant organ formation	IEP	Neighborhood
CC	GO:1990391	DNA repair complex	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood
BP	GO:2001252	positive regulation of chromosome organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR032474	Argonaute_N	48	203
IPR032472	ArgoL2	406	451
IPR003165	Piwi	551	857
IPR003100	PAZ_dom	269	396
IPR014811	ArgoL1	215	263

External Links

No external refs found!

AT5G21150 (AGO9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation