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MA_10554g0010


Description : component MPE1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex


Gene families : OG0001557 (Archaeplastida) Phylogenetic Tree(s): OG0001557_tree ,
OG_05_0004108 (LandPlants) Phylogenetic Tree(s): OG_05_0004108_tree ,
OG_06_0006606 (SeedPlants) Phylogenetic Tree(s): OG_06_0006606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_10554g0010
Cluster HCCA: Cluster_420

Target Alias Description ECC score Gene Family Method Actions
AT4G17410 No alias DWNN domain, a CCHC-type zinc finger 0.02 Archaeplastida
Cre12.g543303 No alias No description available 0.02 Archaeplastida
GSVIVT01035456001 No alias E3 ubiquitin ligase PARAQUAT TOLERANCE 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os10g29560.1 No alias component MPE1 of Cleavage and Polyadenylation... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
InterPro domains Description Start Stop
IPR025829 Zn_knuckle_CX2CX3GHX4C 212 232
IPR014891 DWNN_domain 24 80
No external refs found!