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  5. MA_106351g0010

MA_106351g0010


Description : no hits & (original description: none)


Gene families : OG0001085 (Archaeplastida) Phylogenetic Tree(s): OG0001085_tree ,
OG_05_0000943 (LandPlants) Phylogenetic Tree(s): OG_05_0000943_tree ,
OG_06_0004341 (SeedPlants) Phylogenetic Tree(s): OG_06_0004341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_106351g0010
Cluster HCCA: Cluster_491

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00102010 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G02890 No alias RING/FYVE/PHD zinc finger superfamily protein 0.02 Archaeplastida
AT5G16680 No alias RING/FYVE/PHD zinc finger superfamily protein 0.18 Archaeplastida
GSVIVT01024330001 No alias No description available 0.03 Archaeplastida
Gb_18601 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_19412 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_40677 No alias no hits & (original description: none) 0.1 Archaeplastida
LOC_Os10g42196.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os11g18770.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os12g24540.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_175822g0010 No alias no hits & (original description: none) 0.15 Archaeplastida
Mp6g14570.1 No alias no hits & (original description: none) 0.16 Archaeplastida
Pp3c5_28530V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.16 Archaeplastida
Pp3c6_1100V3.1 No alias RING/FYVE/PHD zinc finger superfamily protein 0.12 Archaeplastida
Smo439529 No alias No description available 0.06 Archaeplastida
Zm00001e029823_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!