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MA_1065g0010


Description : component SRm160 of RNA quality control Exon Junction complex


Gene families : OG0004040 (Archaeplastida) Phylogenetic Tree(s): OG0004040_tree ,
OG_05_0003861 (LandPlants) Phylogenetic Tree(s): OG_05_0003861_tree ,
OG_06_0005016 (SeedPlants) Phylogenetic Tree(s): OG_06_0005016_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_1065g0010
Cluster HCCA: Cluster_485

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01024906001 No alias RNA processing.RNA quality control Exon Junction complex... 0.03 Archaeplastida
Gb_33063 No alias component SRm160 of RNA quality control Exon Junction complex 0.07 Archaeplastida
Mp8g09170.1 No alias component SRm160 of RNA quality control Exon Junction complex 0.05 Archaeplastida
Pp3c3_30240V3.1 No alias splicing factor PWI domain-containing protein 0.03 Archaeplastida
Solyc09g030390.3.1 No alias component SRm160 of RNA quality control Exon Junction complex 0.02 Archaeplastida
Zm00001e001194_P001 No alias component SRm160 of RNA quality control Exon Junction complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006397 mRNA processing IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002483 PWI_dom 46 115
No external refs found!