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  5. MA_107341g0010

MA_107341g0010


Description : component ADA3 of SAGA transcription co-activator complex


Gene families : OG0002472 (Archaeplastida) Phylogenetic Tree(s): OG0002472_tree ,
OG_05_0001862 (LandPlants) Phylogenetic Tree(s): OG_05_0001862_tree ,
OG_06_0002456 (SeedPlants) Phylogenetic Tree(s): OG_06_0002456_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_107341g0010
Cluster HCCA: Cluster_393

Target Alias Description ECC score Gene Family Method Actions
AT4G29790 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.06 Archaeplastida
GSVIVT01001003001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.02 Archaeplastida
GSVIVT01015158001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.12 Archaeplastida
GSVIVT01036136001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Gb_07255 No alias component ADA3 of SAGA transcription co-activator complex 0.07 Archaeplastida
Gb_30047 No alias component ADA3 of SAGA transcription co-activator complex 0.02 Archaeplastida
LOC_Os01g73620.1 No alias component ADA3 of SAGA transcription co-activator complex 0.07 Archaeplastida
LOC_Os05g01690.1 No alias component ADA3 of SAGA transcription co-activator complex 0.03 Archaeplastida
Mp1g06630.1 No alias component ADA3 of SAGA transcription co-activator complex 0.06 Archaeplastida
Pp3c15_5990V3.1 No alias No annotation 0.04 Archaeplastida
Pp3c20_610V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c20_790V3.1 No alias No annotation 0.08 Archaeplastida
Pp3c23_22200V3.1 No alias No annotation 0.04 Archaeplastida
Smo407119 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.07 Archaeplastida
Solyc07g040980.3.1 No alias component ADA3 of SAGA transcription co-activator complex 0.09 Archaeplastida
Solyc11g006960.2.1 No alias component ADA3 of SAGA transcription co-activator complex 0.08 Archaeplastida
Zm00001e018678_P002 No alias component ADA3 of SAGA transcription co-activator complex 0.1 Archaeplastida
Zm00001e027665_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.12 Archaeplastida
Zm00001e029688_P001 No alias component ADA3 of SAGA transcription co-activator complex 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
InterPro domains Description Start Stop
IPR019340 Histone_AcTrfase_su3 649 749
No external refs found!