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  5. MA_108727g0010

MA_108727g0010


Description : transcription factor (MYB-related)


Gene families : OG0002278 (Archaeplastida) Phylogenetic Tree(s): OG0002278_tree ,
OG_05_0001767 (LandPlants) Phylogenetic Tree(s): OG_05_0001767_tree ,
OG_06_0002658 (SeedPlants) Phylogenetic Tree(s): OG_06_0002658_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_108727g0010
Cluster HCCA: Cluster_447

Target Alias Description ECC score Gene Family Method Actions
AT2G44430 No alias DNA-binding bromodomain-containing protein 0.02 Archaeplastida
Smo437976 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Zm00001e034541_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001487 Bromodomain 456 533
No external refs found!