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  5. AT5G22600

AT5G22600


Description : FBD / Leucine Rich Repeat domains containing protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G22600
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G13780 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida
AT1G16940 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT1G32020 No alias F-box family protein 0.03 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.02 Archaeplastida
AT1G66640 No alias RNI-like superfamily protein 0.04 Archaeplastida
AT1G78750 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT4G13985 FBD1 FBD-associated F-box protein 0.03 Archaeplastida
AT5G18770 No alias F-box/FBD-like domains containing protein 0.06 Archaeplastida
AT5G22670 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT5G25850 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G27750 No alias F-box/FBD-like domains containing protein 0.03 Archaeplastida
AT5G44950 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.04 Archaeplastida
AT5G44980 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G53635 No alias F-box/RNI-like/FBD-like domains-containing protein 0.05 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005815 microtubule organizing center IEP Neighborhood
CC GO:0005819 spindle IEP Neighborhood
CC GO:0005874 microtubule IEP Neighborhood
CC GO:0005881 cytoplasmic microtubule IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0007129 synapsis IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
CC GO:0009524 phragmoplast IEP Neighborhood
BP GO:0009612 response to mechanical stimulus IEP Neighborhood
BP GO:0009652 thigmotropism IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
CC GO:0010005 cortical microtubule, transverse to long axis IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0042138 meiotic DNA double-strand break formation IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
CC GO:0055028 cortical microtubule IEP Neighborhood
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
InterPro domains Description Start Stop
IPR006566 FBD 247 290
IPR013101 Leu-rich_rpt_2 32 56
No external refs found!