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  5. MA_111475g0010

MA_111475g0010


Description : Zinc finger CCCH domain-containing protein 55 OS=Oryza sativa subsp. japonica (sp|q6yyc0|c3h55_orysj : 86.7)


Gene families : OG0001445 (Archaeplastida) Phylogenetic Tree(s): OG0001445_tree ,
OG_05_0001091 (LandPlants) Phylogenetic Tree(s): OG_05_0001091_tree ,
OG_06_0001027 (SeedPlants) Phylogenetic Tree(s): OG_06_0001027_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_111475g0010
Cluster HCCA: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00110320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 Archaeplastida
AMTR_s00154p00086540 evm_27.TU.AmTr_v1... Zinc finger CCCH domain-containing protein 38... 0.03 Archaeplastida
AMTR_s00154p00087040 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT3G18640 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 Archaeplastida
GSVIVT01008114001 No alias Zinc finger CCCH domain-containing protein 38... 0.04 Archaeplastida
GSVIVT01021094001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 Archaeplastida
Gb_00875 No alias C3H zinc finger transcription factor 0.04 Archaeplastida
Gb_19122 No alias C3H zinc finger transcription factor 0.02 Archaeplastida
Gb_26302 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g41790.1 No alias C3H zinc finger transcription factor 0.06 Archaeplastida
MA_10435667g0010 No alias Zinc finger CCCH domain-containing protein 38... 0.04 Archaeplastida
MA_10435667g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_111475g0020 No alias no hits & (original description: none) 0.17 Archaeplastida
MA_321233g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp1g05400.1 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.06 Archaeplastida
Pp3c4_15980V3.1 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.05 Archaeplastida
Solyc03g006350.3.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Solyc06g069440.3.1 No alias Zinc finger CCCH domain-containing protein 38... 0.02 Archaeplastida
Zm00001e000843_P002 No alias Zinc finger CCCH domain-containing protein 55 OS=Oryza... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!