1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_111727g0010

MA_111727g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003505 (LandPlants) Phylogenetic Tree(s): OG_05_0003505_tree ,
OG_06_0006937 (SeedPlants) Phylogenetic Tree(s): OG_06_0006937_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_111727g0010
Cluster HCCA: Cluster_392

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT4G09100 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G24015 No alias RING/U-box superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00000821.27 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g54830.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_1115518g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_2679g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g115465.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc05g018760.3.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e007157_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e031442_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e039357_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 57 100
No external refs found!