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  5. MA_11172g0010

MA_11172g0010


Description : cyclic nucleotide-gated cation channel (CNGC)


Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0000296 (LandPlants) Phylogenetic Tree(s): OG_05_0000296_tree ,
OG_06_0000523 (SeedPlants) Phylogenetic Tree(s): OG_06_0000523_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_11172g0010
Cluster HCCA: Cluster_49

Target Alias Description ECC score Gene Family Method Actions
AT1G19780 ATCNGC8, CNGC8 cyclic nucleotide gated channel 8 0.02 Archaeplastida
AT2G24610 ATCNGC14, CNGC14 cyclic nucleotide-gated channel 14 0.03 Archaeplastida
AT3G17690 CNGC19, ATCNGC19 cyclic nucleotide gated channel 19 0.04 Archaeplastida
AT3G48010 ATCNGC16, CNGC16 cyclic nucleotide-gated channel 16 0.02 Archaeplastida
AT5G15410 DND1, ATCNGC2, CNGC2 Cyclic nucleotide-regulated ion channel family protein 0.03 Archaeplastida
GSVIVT01007785001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
GSVIVT01014442001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.07 Archaeplastida
GSVIVT01025208001 No alias Solute transport.channels.VIC superfamily.cyclic... 0.03 Archaeplastida
MA_10001478g0010 No alias cyclic nucleotide-gated cation channel (CNGC) 0.05 Archaeplastida
Pp3c15_11518V3.1 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Archaeplastida
Smo89324 No alias Solute transport.channels.VIC superfamily.cyclic... 0.02 Archaeplastida
Zm00001e012009_P001 No alias cyclic nucleotide-gated cation channel (CNGC).... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 82 170
No external refs found!