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  5. MA_111876g0010

MA_111876g0010


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 469.0)


Gene families : OG0014395 (Archaeplastida) Phylogenetic Tree(s): OG0014395_tree ,
OG_05_0015031 (LandPlants) Phylogenetic Tree(s): OG_05_0015031_tree ,
OG_06_0029944 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_111876g0010
Cluster HCCA: Cluster_19

Target Alias Description ECC score Gene Family Method Actions
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Smo116559 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 261 290
IPR002885 Pentatricopeptide_repeat 292 322
IPR002885 Pentatricopeptide_repeat 230 259
IPR002885 Pentatricopeptide_repeat 427 451
IPR002885 Pentatricopeptide_repeat 202 228
IPR002885 Pentatricopeptide_repeat 527 551
IPR002885 Pentatricopeptide_repeat 36 74
IPR002885 Pentatricopeptide_repeat 453 501
IPR002885 Pentatricopeptide_repeat 352 399
IPR002885 Pentatricopeptide_repeat 129 176
No external refs found!