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Description : Pentatricopeptide repeat-containing protein At3g09040, mitochondrial OS=Arabidopsis thaliana (sp|q9ss83|pp220_arath : 506.0)
Gene families : OG0003648 (Archaeplastida) Phylogenetic Tree(s): OG0003648_tree ,
OG_05_0092603 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073442 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_113202g0010 | |
| Cluster | HCCA: Cluster_251 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_12426 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.08 | Archaeplastida | |
| MA_681272g0010 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 517 | 547 |
| IPR002885 | Pentatricopeptide_repeat | 219 | 246 |
| IPR002885 | Pentatricopeptide_repeat | 282 | 330 |
| IPR002885 | Pentatricopeptide_repeat | 616 | 663 |
| IPR002885 | Pentatricopeptide_repeat | 550 | 598 |
| IPR002885 | Pentatricopeptide_repeat | 717 | 764 |
| IPR002885 | Pentatricopeptide_repeat | 415 | 463 |
| IPR002885 | Pentatricopeptide_repeat | 129 | 141 |
| IPR002885 | Pentatricopeptide_repeat | 100 | 126 |
| IPR002885 | Pentatricopeptide_repeat | 386 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 193 | 218 |
| IPR002885 | Pentatricopeptide_repeat | 690 | 716 |
| IPR002885 | Pentatricopeptide_repeat | 791 | 816 |
| IPR002885 | Pentatricopeptide_repeat | 254 | 279 |
| IPR002885 | Pentatricopeptide_repeat | 355 | 384 |
| No external refs found! |