Description : E3 ubiquitin ligase (PUB)
Gene families : OG0012840 (Archaeplastida) Phylogenetic Tree(s): OG0012840_tree ,
OG_05_0008777 (LandPlants) Phylogenetic Tree(s): OG_05_0008777_tree ,
OG_06_0012741 (SeedPlants) Phylogenetic Tree(s): OG_06_0012741_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_113300g0020 | |
Cluster | HCCA: Cluster_491 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Gb_00701 | No alias | E3 ubiquitin ligase (PUB) | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004484 | mRNA guanylyltransferase activity | IEP | Neighborhood |
MF | GO:0004525 | ribonuclease III activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
BP | GO:0006370 | 7-methylguanosine mRNA capping | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
MF | GO:0008192 | RNA guanylyltransferase activity | IEP | Neighborhood |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
BP | GO:0009452 | 7-methylguanosine RNA capping | IEP | Neighborhood |
BP | GO:0016579 | protein deubiquitination | IEP | Neighborhood |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Neighborhood |
MF | GO:0032296 | double-stranded RNA-specific ribonuclease activity | IEP | Neighborhood |
BP | GO:0036260 | RNA capping | IEP | Neighborhood |
MF | GO:0036459 | thiol-dependent ubiquitinyl hydrolase activity | IEP | Neighborhood |
MF | GO:0070568 | guanylyltransferase activity | IEP | Neighborhood |
BP | GO:0070646 | protein modification by small protein removal | IEP | Neighborhood |
MF | GO:0101005 | ubiquitinyl hydrolase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR003613 | Ubox_domain | 266 | 333 |
No external refs found! |