Description : no hits & (original description: none)
Gene families : OG0003427 (Archaeplastida) Phylogenetic Tree(s): OG0003427_tree ,
OG_05_0101423 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0083107 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_113769g0010 | |
Cluster | HCCA: Cluster_491 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G79280 | NUA, AtTPR | nuclear pore anchor | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00000404.46 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.01 | Archaeplastida | |
GSVIVT01036698001 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.04 | Archaeplastida | |
Gb_36757 | No alias | NUA nucleoporin of nuclear pore complex | 0.02 | Archaeplastida | |
LOC_Os02g50799.1 | No alias | NUA nucleoporin of nuclear pore complex | 0.02 | Archaeplastida | |
Mp2g14600.1 | No alias | NUA nucleoporin of nuclear pore complex | 0.04 | Archaeplastida | |
Pp3c8_8020V3.1 | No alias | nuclear pore anchor | 0.02 | Archaeplastida | |
Smo444132 | No alias | Protein translocation.nucleus.nucleocytoplasmic... | 0.02 | Archaeplastida | |
Solyc06g053570.2.1 | No alias | NUA nucleoporin of nuclear pore complex | 0.04 | Archaeplastida | |
Solyc06g053590.4.1 | No alias | No annotation | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006606 | protein import into nucleus | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000184 | nuclear-transcribed mRNA catabolic process, nonsense-mediated decay | IEP | Neighborhood |
BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
BP | GO:0009057 | macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0009892 | negative regulation of metabolic process | IEP | Neighborhood |
BP | GO:0010605 | negative regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0010629 | negative regulation of gene expression | IEP | Neighborhood |
BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
BP | GO:0048519 | negative regulation of biological process | IEP | Neighborhood |
BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR012929 | TPR/MLP1 | 71 | 123 |
No external refs found! |