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  5. MA_114955g0020

MA_114955g0020


Description : component SNAPC4 of SNAP snRNA transcription factor complex. transcription factor (MYB)


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0006168 (LandPlants) Phylogenetic Tree(s): OG_05_0006168_tree ,
OG_06_0005818 (SeedPlants) Phylogenetic Tree(s): OG_06_0005818_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_114955g0020
Cluster HCCA: Cluster_522

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021038.78 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Cre07.g345350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016393001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01034171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_23308 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp1g08640.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.04 Archaeplastida
Pp3c13_8880V3.1 No alias myb domain protein 4r1 0.02 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.02 Archaeplastida
Zm00001e035233_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003887 DNA-directed DNA polymerase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
CC GO:0030684 preribosome IEP Neighborhood
CC GO:0032040 small-subunit processome IEP Neighborhood
MF GO:0034061 DNA polymerase activity IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 271 311
IPR001005 SANT/Myb 218 262
IPR001005 SANT/Myb 164 208
IPR001005 SANT/Myb 112 156
No external refs found!