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Description : BEST Arabidopsis thaliana protein match is: SWITCH1 (TAIR:AT5G51330.1); Has 170 Blast hits to 162 proteins in 36 species: Archae - 3; Bacteria - 6; Metazoa - 6; Fungi - 4; Plants - 117; Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).
Gene families : OG0004934 (Archaeplastida) Phylogenetic Tree(s): OG0004934_tree ,
OG_05_0004311 (LandPlants) Phylogenetic Tree(s): OG_05_0004311_tree ,
OG_06_0007031 (SeedPlants) Phylogenetic Tree(s): OG_06_0007031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT5G23610 | |
| Cluster | HCCA: Cluster_4 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005634 | nucleus | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000079 | regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0000302 | response to reactive oxygen species | IEP | Neighborhood |
| BP | GO:0000303 | response to superoxide | IEP | Neighborhood |
| BP | GO:0000305 | response to oxygen radical | IEP | Neighborhood |
| BP | GO:0000373 | Group II intron splicing | IEP | Neighborhood |
| BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
| BP | GO:0000724 | double-strand break repair via homologous recombination | IEP | Neighborhood |
| BP | GO:0000725 | recombinational repair | IEP | Neighborhood |
| BP | GO:0000956 | nuclear-transcribed mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0001932 | regulation of protein phosphorylation | IEP | Neighborhood |
| BP | GO:0001933 | negative regulation of protein phosphorylation | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0003723 | RNA binding | IEP | Neighborhood |
| MF | GO:0004860 | protein kinase inhibitor activity | IEP | Neighborhood |
| MF | GO:0004861 | cyclin-dependent protein serine/threonine kinase inhibitor activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| BP | GO:0006338 | chromatin remodeling | IEP | Neighborhood |
| BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006366 | transcription by RNA polymerase II | IEP | Neighborhood |
| BP | GO:0006396 | RNA processing | IEP | Neighborhood |
| BP | GO:0006401 | RNA catabolic process | IEP | Neighborhood |
| BP | GO:0006402 | mRNA catabolic process | IEP | Neighborhood |
| BP | GO:0006405 | RNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006406 | mRNA export from nucleus | IEP | Neighborhood |
| BP | GO:0006469 | negative regulation of protein kinase activity | IEP | Neighborhood |
| BP | GO:0006979 | response to oxidative stress | IEP | Neighborhood |
| BP | GO:0008219 | cell death | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009266 | response to temperature stimulus | IEP | Neighborhood |
| BP | GO:0009314 | response to radiation | IEP | Neighborhood |
| BP | GO:0009416 | response to light stimulus | IEP | Neighborhood |
| BP | GO:0009628 | response to abiotic stimulus | IEP | Neighborhood |
| BP | GO:0009648 | photoperiodism | IEP | Neighborhood |
| BP | GO:0009737 | response to abscisic acid | IEP | Neighborhood |
| BP | GO:0009937 | regulation of gibberellic acid mediated signaling pathway | IEP | Neighborhood |
| BP | GO:0010029 | regulation of seed germination | IEP | Neighborhood |
| BP | GO:0010048 | vernalization response | IEP | Neighborhood |
| BP | GO:0010150 | leaf senescence | IEP | Neighborhood |
| BP | GO:0010431 | seed maturation | IEP | Neighborhood |
| BP | GO:0010440 | stomatal lineage progression | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0010563 | negative regulation of phosphorus metabolic process | IEP | Neighborhood |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0010628 | positive regulation of gene expression | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| CC | GO:0016514 | SWI/SNF complex | IEP | Neighborhood |
| MF | GO:0016538 | cyclin-dependent protein serine/threonine kinase regulator activity | IEP | Neighborhood |
| BP | GO:0016973 | poly(A)+ mRNA export from nucleus | IEP | Neighborhood |
| MF | GO:0019207 | kinase regulator activity | IEP | Neighborhood |
| MF | GO:0019210 | kinase inhibitor activity | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | Neighborhood |
| MF | GO:0019887 | protein kinase regulator activity | IEP | Neighborhood |
| BP | GO:0022414 | reproductive process | IEP | Neighborhood |
| MF | GO:0030291 | protein serine/threonine kinase inhibitor activity | IEP | Neighborhood |
| MF | GO:0030332 | cyclin binding | IEP | Neighborhood |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0031400 | negative regulation of protein modification process | IEP | Neighborhood |
| BP | GO:0032269 | negative regulation of cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0032502 | developmental process | IEP | Neighborhood |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:0033673 | negative regulation of kinase activity | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | Neighborhood |
| BP | GO:0040020 | regulation of meiotic nuclear division | IEP | Neighborhood |
| BP | GO:0042325 | regulation of phosphorylation | IEP | Neighborhood |
| BP | GO:0042326 | negative regulation of phosphorylation | IEP | Neighborhood |
| BP | GO:0043086 | negative regulation of catalytic activity | IEP | Neighborhood |
| BP | GO:0043549 | regulation of kinase activity | IEP | Neighborhood |
| BP | GO:0044092 | negative regulation of molecular function | IEP | Neighborhood |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | Neighborhood |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | Neighborhood |
| CC | GO:0044454 | nuclear chromosome part | IEP | Neighborhood |
| BP | GO:0045736 | negative regulation of cyclin-dependent protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0045787 | positive regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0045836 | positive regulation of meiotic nuclear division | IEP | Neighborhood |
| BP | GO:0045859 | regulation of protein kinase activity | IEP | Neighborhood |
| BP | GO:0045893 | positive regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0045927 | positive regulation of growth | IEP | Neighborhood |
| BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0045936 | negative regulation of phosphate metabolic process | IEP | Neighborhood |
| BP | GO:0046677 | response to antibiotic | IEP | Neighborhood |
| BP | GO:0046700 | heterocycle catabolic process | IEP | Neighborhood |
| BP | GO:0048507 | meristem development | IEP | Neighborhood |
| BP | GO:0048518 | positive regulation of biological process | IEP | Neighborhood |
| BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
| BP | GO:0048573 | photoperiodism, flowering | IEP | Neighborhood |
| BP | GO:0050657 | nucleic acid transport | IEP | Neighborhood |
| BP | GO:0050658 | RNA transport | IEP | Neighborhood |
| BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
| BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| BP | GO:0051028 | mRNA transport | IEP | Neighborhood |
| BP | GO:0051168 | nuclear export | IEP | Neighborhood |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051236 | establishment of RNA localization | IEP | Neighborhood |
| BP | GO:0051248 | negative regulation of protein metabolic process | IEP | Neighborhood |
| BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0051338 | regulation of transferase activity | IEP | Neighborhood |
| BP | GO:0051348 | negative regulation of transferase activity | IEP | Neighborhood |
| BP | GO:0051445 | regulation of meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0051446 | positive regulation of meiotic cell cycle | IEP | Neighborhood |
| BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
| BP | GO:0051783 | regulation of nuclear division | IEP | Neighborhood |
| BP | GO:0051785 | positive regulation of nuclear division | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0065007 | biological regulation | IEP | Neighborhood |
| CC | GO:0070603 | SWI/SNF superfamily-type complex | IEP | Neighborhood |
| BP | GO:0071900 | regulation of protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0071901 | negative regulation of protein serine/threonine kinase activity | IEP | Neighborhood |
| BP | GO:0090068 | positive regulation of cell cycle process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:0090693 | plant organ senescence | IEP | Neighborhood |
| BP | GO:0097031 | obsolete mitochondrial respiratory chain complex I biogenesis | IEP | Neighborhood |
| BP | GO:0097034 | obsolete mitochondrial respiratory chain complex IV biogenesis | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0097305 | response to alcohol | IEP | Neighborhood |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1900140 | regulation of seedling development | IEP | Neighborhood |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | Neighborhood |
| BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:1904029 | regulation of cyclin-dependent protein kinase activity | IEP | Neighborhood |
| BP | GO:1904030 | negative regulation of cyclin-dependent protein kinase activity | IEP | Neighborhood |
| CC | GO:1904949 | ATPase complex | IEP | Neighborhood |
| BP | GO:2000243 | positive regulation of reproductive process | IEP | Neighborhood |
No InterPro domains available for this sequence
| No external refs found! |