AT5G23730 (RUP2)


Aliases : RUP2

Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG0007809 (Archaeplastida) Phylogenetic Tree(s): OG0007809_tree ,
OG_05_0005588 (LandPlants) Phylogenetic Tree(s): OG_05_0005588_tree ,
OG_06_0006892 (SeedPlants) Phylogenetic Tree(s): OG_06_0006892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G23730
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00259660 evm_27.TU.AmTr_v1... WD repeat-containing protein RUP2 OS=Arabidopsis thaliana 0.04 Archaeplastida
LOC_Os02g02380.1 No alias WD repeat-containing protein RUP2 OS=Arabidopsis... 0.05 Archaeplastida
Smo444188 No alias WD repeat-containing protein RUP1 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005834 heterotrimeric G-protein complex ISS Interproscan
BP GO:0009658 chloroplast organization IMP Interproscan
BP GO:0010224 response to UV-B IGI Interproscan
BP GO:0043496 regulation of protein homodimerization activity IDA Interproscan
CC GO:0080008 Cul4-RING E3 ubiquitin ligase complex ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0004321 fatty-acyl-CoA synthase activity IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008655 pyrimidine-containing compound salvage IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009581 detection of external stimulus IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009744 response to sucrose IEP Neighborhood
BP GO:0009801 cinnamic acid ester metabolic process IEP Neighborhood
BP GO:0009812 flavonoid metabolic process IEP Neighborhood
BP GO:0009813 flavonoid biosynthetic process IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP Neighborhood
BP GO:0010411 xyloglucan metabolic process IEP Neighborhood
MF GO:0015205 nucleobase transmembrane transporter activity IEP Neighborhood
MF GO:0016207 4-coumarate-CoA ligase activity IEP Neighborhood
MF GO:0016405 CoA-ligase activity IEP Neighborhood
MF GO:0016408 C-acyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0016878 acid-thiol ligase activity IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0032958 inositol phosphate biosynthetic process IEP Neighborhood
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP Neighborhood
BP GO:0034285 response to disaccharide IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043100 pyrimidine nucleobase salvage IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0046283 anthocyanin-containing compound metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0047213 anthocyanidin 3-O-glucosyltransferase activity IEP Neighborhood
MF GO:0050284 sinapate 1-glucosyltransferase activity IEP Neighborhood
BP GO:0051552 flavone metabolic process IEP Neighborhood
BP GO:0051553 flavone biosynthetic process IEP Neighborhood
BP GO:0051554 flavonol metabolic process IEP Neighborhood
BP GO:0051555 flavonol biosynthetic process IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0080043 quercetin 3-O-glucosyltransferase activity IEP Neighborhood
MF GO:0080044 quercetin 7-O-glucosyltransferase activity IEP Neighborhood
BP GO:0080167 response to karrikin IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 232 265
No external refs found!