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  5. MA_117552g0010

MA_117552g0010


Description : RNA pseudouridine synthase 6, chloroplastic OS=Arabidopsis thaliana (sp|q9svs0|pus6_arath : 221.0)


Gene families : OG0005363 (Archaeplastida) Phylogenetic Tree(s): OG0005363_tree ,
OG_05_0001969 (LandPlants) Phylogenetic Tree(s): OG_05_0001969_tree ,
OG_06_0001698 (SeedPlants) Phylogenetic Tree(s): OG_06_0001698_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_117552g0010
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AT4G21770 No alias Pseudouridine synthase family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!