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  5. AT5G24180

AT5G24180


Description : Lipase class 3-related protein


Gene families : OG0000530 (Archaeplastida) Phylogenetic Tree(s): OG0000530_tree ,
OG_05_0000290 (LandPlants) Phylogenetic Tree(s): OG_05_0000290_tree ,
OG_06_0001653 (SeedPlants) Phylogenetic Tree(s): OG_06_0001653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G24180
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT5G24230 No alias Lipase class 3-related protein 0.05 Archaeplastida
Gb_11151 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g39810.1 No alias GDSL esterase/lipase At4g10955 OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000374 Group III intron splicing IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003964 RNA-directed DNA polymerase activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
BP GO:0006278 RNA-dependent DNA biosynthetic process IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0010018 far-red light signaling pathway IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0042753 positive regulation of circadian rhythm IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0051026 chiasma assembly IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071490 cellular response to far red light IEP Neighborhood
BP GO:0071897 DNA biosynthetic process IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR002921 Fungal_lipase-like 119 194
No external refs found!