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  5. MA_118446g0010

MA_118446g0010


Description : Endoribonuclease Dicer homolog 3a OS=Oryza sativa subsp. japonica (sp|q5n870|dcl3a_orysj : 184.0)


Gene families : OG0000221 (Archaeplastida) Phylogenetic Tree(s): OG0000221_tree ,
OG_05_0010115 (LandPlants) Phylogenetic Tree(s): OG_05_0010115_tree ,
OG_06_0009709 (SeedPlants) Phylogenetic Tree(s): OG_06_0009709_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_118446g0010
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00252700 evm_27.TU.AmTr_v1... RNA biosynthesis.siRNA biogenesis.RTL2 ribonuclease-III... 0.05 Archaeplastida
AMTR_s00016p00258500 evm_27.TU.AmTr_v1... RNA biosynthesis.siRNA biogenesis.DCL-type endoribonuclease 0.04 Archaeplastida
Cre02.g141000 No alias Endoribonuclease Dicer homolog 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01001045001 No alias RNA biosynthesis.siRNA biogenesis.DRB4-DRB7.1 regulator... 0.03 Archaeplastida
Gb_34767 No alias endoribonuclease (DCL3). endoribonuclease (DCL4) 0.03 Archaeplastida
Solyc06g048960.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 113 227
No external refs found!