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  5. MA_11893g0010

MA_11893g0010


Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 577.0)


Gene families : OG0030279 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0028058 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0026314 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_11893g0010
Cluster HCCA: Cluster_482

Target Alias Description ECC score Gene Family Method Actions
Gb_14729 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032867 DYW_dom 692 774
IPR002885 Pentatricopeptide_repeat 519 566
IPR002885 Pentatricopeptide_repeat 215 263
IPR002885 Pentatricopeptide_repeat 115 162
IPR002885 Pentatricopeptide_repeat 418 465
IPR002885 Pentatricopeptide_repeat 493 517
IPR002885 Pentatricopeptide_repeat 89 114
IPR002885 Pentatricopeptide_repeat 660 688
IPR002885 Pentatricopeptide_repeat 319 349
IPR002885 Pentatricopeptide_repeat 191 211
IPR002885 Pentatricopeptide_repeat 291 317
IPR002885 Pentatricopeptide_repeat 594 617
No external refs found!