MA_11993g0010

Description : no hits & (original description: none)

Gene families : OG0004650 (Archaeplastida) Phylogenetic Tree(s): OG0004650_tree ,
OG_05_0005853 (LandPlants) Phylogenetic Tree(s): OG_05_0005853_tree ,
OG_06_0007228 (SeedPlants) Phylogenetic Tree(s): OG_06_0007228_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_11993g0010
Cluster	HCCA: Cluster_427

Target	Alias	Description	ECC score	Gene Family Method	Actions
Cpa\|evm.model.tig00001086.5	No alias	RNA processing.RNA modification.dihydrouridylation.tRNA...	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006399	tRNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008033	tRNA processing	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	None	Extended
MF	GO:0017150	tRNA dihydrouridine synthase activity	IEA	Interproscan
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0048037	cofactor binding	None	Extended
MF	GO:0050660	flavin adenine dinucleotide binding	IEA	Interproscan
MF	GO:0050662	coenzyme binding	None	Extended
BP	GO:0055114	oxidation-reduction process	IEA	Interproscan
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140098	catalytic activity, acting on RNA	None	Extended
MF	GO:0140101	catalytic activity, acting on a tRNA	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0001882	nucleoside binding	IEP	Neighborhood
MF	GO:0001883	purine nucleoside binding	IEP	Neighborhood
MF	GO:0003924	GTPase activity	IEP	Neighborhood
MF	GO:0005525	GTP binding	IEP	Neighborhood
BP	GO:0006066	alcohol metabolic process	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
BP	GO:0016311	dephosphorylation	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0017076	purine nucleotide binding	IEP	Neighborhood
MF	GO:0019001	guanyl nucleotide binding	IEP	Neighborhood
BP	GO:0019751	polyol metabolic process	IEP	Neighborhood
MF	GO:0032549	ribonucleoside binding	IEP	Neighborhood
MF	GO:0032550	purine ribonucleoside binding	IEP	Neighborhood
MF	GO:0032553	ribonucleotide binding	IEP	Neighborhood
MF	GO:0032555	purine ribonucleotide binding	IEP	Neighborhood
MF	GO:0032561	guanyl ribonucleotide binding	IEP	Neighborhood
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	Neighborhood
BP	GO:0043647	inositol phosphate metabolic process	IEP	Neighborhood
BP	GO:0044282	small molecule catabolic process	IEP	Neighborhood
BP	GO:0046164	alcohol catabolic process	IEP	Neighborhood
BP	GO:0046174	polyol catabolic process	IEP	Neighborhood
BP	GO:0046434	organophosphate catabolic process	IEP	Neighborhood
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	Neighborhood
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	Neighborhood
BP	GO:0071545	inositol phosphate catabolic process	IEP	Neighborhood
MF	GO:0097367	carbohydrate derivative binding	IEP	Neighborhood
BP	GO:1901615	organic hydroxy compound metabolic process	IEP	Neighborhood
BP	GO:1901616	organic hydroxy compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001269	tRNA_hU_synthase	25	163

External Links

No external refs found!

MA_11993g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation