Description : no hits & (original description: none)
Gene families : OG0003932 (Archaeplastida) Phylogenetic Tree(s): OG0003932_tree ,
OG_05_0002864 (LandPlants) Phylogenetic Tree(s): OG_05_0002864_tree ,
OG_06_0002483 (SeedPlants) Phylogenetic Tree(s): OG_06_0002483_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_121040g0010 | |
Cluster | HCCA: Cluster_328 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
LOC_Os03g03070.1 | No alias | MADS-box transcription factor 50 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
LOC_Os04g38780.1 | No alias | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.03 | Archaeplastida | |
MA_1090469g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_412147g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_4995528g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_607627g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_8447039g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
Solyc01g092950.3.1 | No alias | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
Solyc01g093965.2.1 | No alias | MADS-box protein SOC1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Solyc06g150109.1.1 | No alias | MADS-box protein AGL42 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
CC | GO:0005634 | nucleus | IEA | Interproscan |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0005515 | protein binding | IEP | Neighborhood |
MF | GO:0046983 | protein dimerization activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002487 | TF_Kbox | 2 | 60 |
No external refs found! |