MA_12174g0010

Description : transcription factor (HD-ZIP I/II)

Gene families : OG0000355 (Archaeplastida) Phylogenetic Tree(s): OG0000355_tree ,
OG_05_0000278 (LandPlants) Phylogenetic Tree(s): OG_05_0000278_tree ,
OG_06_0000297 (SeedPlants) Phylogenetic Tree(s): OG_06_0000297_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_12174g0010
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00245530	evm_27.TU.AmTr_v1...	No description available	0.04	Archaeplastida
AT2G22800	HAT9	Homeobox-leucine zipper protein family	0.03	Archaeplastida
AT2G44910	HB4, ATHB-4, ATHB4	homeobox-leucine zipper protein 4	0.04	Archaeplastida
AT5G47370	HAT2	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	0.02	Archaeplastida
Cpa\|evm.model.tig00000203.28	No alias	No description available	0.01	Archaeplastida
GSVIVT01009274001	No alias	RNA biosynthesis.transcriptional activation.HB...	0.05	Archaeplastida
LOC_Os01g45570.1	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
LOC_Os02g05640.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
LOC_Os06g04850.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
LOC_Os06g04870.1	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
MA_60457g0010	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Mp2g24200.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc01g073910.4.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc02g063520.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc04g077220.3.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc05g008050.3.1	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Solyc08g007270.4.1	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Solyc10g080540.2.1	No alias	transcription factor (HD-ZIP I/II)	0.01	Archaeplastida
Zm00001e000928_P002	No alias	transcription factor (HD-ZIP I/II)	0.02	Archaeplastida
Zm00001e003763_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e009939_P001	No alias	transcription factor (HD-ZIP I/II)	0.04	Archaeplastida
Zm00001e013141_P001	No alias	transcription factor (HD-ZIP I/II)	0.05	Archaeplastida
Zm00001e020345_P001	No alias	transcription factor (HD-ZIP I/II)	0.07	Archaeplastida
Zm00001e025216_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida
Zm00001e029967_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e038644_P001	No alias	transcription factor (HD-ZIP I/II)	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0006479	protein methylation	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008061	chitin binding	IEP	Neighborhood
MF	GO:0008170	N-methyltransferase activity	IEP	Neighborhood
BP	GO:0008213	protein alkylation	IEP	Neighborhood
MF	GO:0008276	protein methyltransferase activity	IEP	Neighborhood
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Neighborhood
BP	GO:0010215	cellulose microfibril organization	IEP	Neighborhood
MF	GO:0015035	protein disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015036	disulfide oxidoreductase activity	IEP	Neighborhood
MF	GO:0015276	ligand-gated ion channel activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
BP	GO:0016043	cellular component organization	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016278	lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
BP	GO:0016569	covalent chromatin modification	IEP	Neighborhood
BP	GO:0016570	histone modification	IEP	Neighborhood
BP	GO:0016571	histone methylation	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
BP	GO:0018022	peptidyl-lysine methylation	IEP	Neighborhood
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEP	Neighborhood
BP	GO:0018205	peptidyl-lysine modification	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022834	ligand-gated channel activity	IEP	Neighborhood
BP	GO:0030198	extracellular matrix organization	IEP	Neighborhood
CC	GO:0031225	anchored component of membrane	IEP	Neighborhood
BP	GO:0032259	methylation	IEP	Neighborhood
BP	GO:0034968	histone lysine methylation	IEP	Neighborhood
MF	GO:0042054	histone methyltransferase activity	IEP	Neighborhood
BP	GO:0043062	extracellular structure organization	IEP	Neighborhood
BP	GO:0043414	macromolecule methylation	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003106	Leu_zip_homeo	185	217
IPR001356	Homeobox_dom	129	183

External Links

No external refs found!

MA_12174g0010

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation