AT5G24670

Description : Cytidine/deoxycytidylate deaminase family protein

Gene families : OG0005969 (Archaeplastida) Phylogenetic Tree(s): OG0005969_tree ,
OG_05_0007757 (LandPlants) Phylogenetic Tree(s): OG_05_0007757_tree ,
OG_06_0010004 (SeedPlants) Phylogenetic Tree(s): OG_06_0010004_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G24670
Cluster	HCCA: Cluster_145

Target	Alias	Description	ECC score	Gene Family Method	Actions
AMTR_s00019p00163930	evm_27.TU.AmTr_v1...	RNA processing.RNA editing.adenosine...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0016787	hydrolase activity	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000156	phosphorelay response regulator activity	IEP	Neighborhood
MF	GO:0000175	3'-5'-exoribonuclease activity	IEP	Neighborhood
MF	GO:0004222	metalloendopeptidase activity	IEP	Neighborhood
MF	GO:0004527	exonuclease activity	IEP	Neighborhood
MF	GO:0004532	exoribonuclease activity	IEP	Neighborhood
CC	GO:0005739	mitochondrion	IEP	Neighborhood
BP	GO:0006505	GPI anchor metabolic process	IEP	Neighborhood
BP	GO:0006506	GPI anchor biosynthetic process	IEP	Neighborhood
MF	GO:0008237	metallopeptidase activity	IEP	Neighborhood
MF	GO:0008408	3'-5' exonuclease activity	IEP	Neighborhood
CC	GO:0016604	nuclear body	IEP	Neighborhood
CC	GO:0016607	nuclear speck	IEP	Neighborhood
MF	GO:0016796	exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016896	exoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
CC	GO:0035061	interchromatin granule	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002125	CMP_dCMP_dom	154	357

External Links

No external refs found!