AT5G24780 (ATVSP1, VSP1)

Aliases : ATVSP1, VSP1

Description : vegetative storage protein 1

Gene families : OG0000337 (Archaeplastida) Phylogenetic Tree(s): OG0000337_tree ,
OG_05_0026493 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0024879 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT5G24780
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AT1G04040	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.04	Archaeplastida
AT4G29270	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.06	Archaeplastida
GSVIVT01016112001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.02	Archaeplastida
GSVIVT01016957001	No alias	Stem 28 kDa glycoprotein OS=Glycine max	0.06	Archaeplastida
GSVIVT01029880001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum	0.05	Archaeplastida
Gb_34529	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
Gb_35343	No alias	no hits & (original description: none)	0.09	Archaeplastida
Gb_35615	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g09740.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
MA_10272409g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_10435570g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	Archaeplastida
MA_131674g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	Archaeplastida
MA_177384g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_522355g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
MA_948726g0010	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
Mp2g01450.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.04	Archaeplastida
Pp3c16_1470V3.1	No alias	HAD superfamily, subfamily IIIB acid phosphatase	0.03	Archaeplastida
Solyc03g093470.3.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
Solyc06g062380.3.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.05	Archaeplastida
Solyc09g090600.3.1	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.03	Archaeplastida
Zm00001e027124_P001	No alias	Acid phosphatase 1 OS=Solanum lycopersicum...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003993	acid phosphatase activity	IDA	Interproscan
MF	GO:0003993	acid phosphatase activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005773	vacuole	IDA	Interproscan
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	IEP	Interproscan
MF	GO:0008134	transcription factor binding	IDA	Interproscan
BP	GO:0008150	biological_process	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009753	response to jasmonic acid	IEP	Interproscan
BP	GO:0009753	response to jasmonic acid	TAS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0016791	phosphatase activity	None	Extended
BP	GO:0042221	response to chemical	None	Extended
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:1901700	response to oxygen-containing compound	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003677	DNA binding	IEP	Neighborhood
MF	GO:0003700	DNA-binding transcription factor activity	IEP	Neighborhood
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004467	long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004565	beta-galactosidase activity	IEP	Neighborhood
MF	GO:0005496	steroid binding	IEP	Neighborhood
CC	GO:0005576	extracellular region	IEP	Neighborhood
CC	GO:0005634	nucleus	IEP	Neighborhood
CC	GO:0005777	peroxisome	IEP	Neighborhood
CC	GO:0005783	endoplasmic reticulum	IEP	Neighborhood
BP	GO:0006355	regulation of transcription, DNA-templated	IEP	Neighborhood
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	Neighborhood
MF	GO:0008142	oxysterol binding	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0008327	methyl-CpG binding	IEP	Neighborhood
MF	GO:0008422	beta-glucosidase activity	IEP	Neighborhood
BP	GO:0009625	response to insect	IEP	Neighborhood
BP	GO:0009653	anatomical structure morphogenesis	IEP	Neighborhood
BP	GO:0009789	positive regulation of abscisic acid-activated signaling pathway	IEP	Neighborhood
BP	GO:0009806	lignan metabolic process	IEP	Neighborhood
BP	GO:0009807	lignan biosynthetic process	IEP	Neighborhood
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	Neighborhood
BP	GO:0009888	tissue development	IEP	Neighborhood
BP	GO:0009889	regulation of biosynthetic process	IEP	Neighborhood
BP	GO:0009913	epidermal cell differentiation	IEP	Neighborhood
BP	GO:0009937	regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009938	negative regulation of gibberellic acid mediated signaling pathway	IEP	Neighborhood
BP	GO:0009966	regulation of signal transduction	IEP	Neighborhood
MF	GO:0009975	cyclase activity	IEP	Neighborhood
BP	GO:0010025	wax biosynthetic process	IEP	Neighborhood
BP	GO:0010091	trichome branching	IEP	Neighborhood
BP	GO:0010093	specification of floral organ identity	IEP	Neighborhood
BP	GO:0010103	stomatal complex morphogenesis	IEP	Neighborhood
BP	GO:0010143	cutin biosynthetic process	IEP	Neighborhood
BP	GO:0010162	seed dormancy process	IEP	Neighborhood
BP	GO:0010166	wax metabolic process	IEP	Neighborhood
CC	GO:0010168	ER body	IEP	Neighborhood
BP	GO:0010325	raffinose family oligosaccharide biosynthetic process	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0010334	sesquiterpene synthase activity	IEP	Neighborhood
BP	GO:0010358	leaf shaping	IEP	Neighborhood
BP	GO:0010468	regulation of gene expression	IEP	Neighborhood
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:0010646	regulation of cell communication	IEP	Neighborhood
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	Neighborhood
MF	GO:0015645	fatty acid ligase activity	IEP	Neighborhood
MF	GO:0015925	galactosidase activity	IEP	Neighborhood
MF	GO:0015926	glucosidase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016713	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0017148	negative regulation of translation	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0019222	regulation of metabolic process	IEP	Neighborhood
BP	GO:0022611	dormancy process	IEP	Neighborhood
BP	GO:0023051	regulation of signaling	IEP	Neighborhood
BP	GO:0030104	water homeostasis	IEP	Neighborhood
BP	GO:0030855	epithelial cell differentiation	IEP	Neighborhood
MF	GO:0031219	levanase activity	IEP	Neighborhood
BP	GO:0031323	regulation of cellular metabolic process	IEP	Neighborhood
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	Neighborhood
MF	GO:0031957	very long-chain fatty acid-CoA ligase activity	IEP	Neighborhood
BP	GO:0032055	negative regulation of translation in response to stress	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
MF	GO:0032934	sterol binding	IEP	Neighborhood
BP	GO:0034249	negative regulation of cellular amide metabolic process	IEP	Neighborhood
BP	GO:0040034	regulation of development, heterochronic	IEP	Neighborhood
BP	GO:0042214	terpene metabolic process	IEP	Neighborhood
BP	GO:0042538	hyperosmotic salinity response	IEP	Neighborhood
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEP	Neighborhood
MF	GO:0043492	ATPase activity, coupled to movement of substances	IEP	Neighborhood
BP	GO:0043555	regulation of translation in response to stress	IEP	Neighborhood
BP	GO:0046246	terpene biosynthetic process	IEP	Neighborhood
MF	GO:0046423	allene-oxide cyclase activity	IEP	Neighborhood
BP	GO:0046688	response to copper ion	IEP	Neighborhood
MF	GO:0047196	long-chain-alcohol O-fatty-acyltransferase activity	IEP	Neighborhood
BP	GO:0048437	floral organ development	IEP	Neighborhood
BP	GO:0048440	carpel development	IEP	Neighborhood
BP	GO:0048481	plant ovule development	IEP	Neighborhood
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	Neighborhood
BP	GO:0048507	meristem development	IEP	Neighborhood
BP	GO:0048509	regulation of meristem development	IEP	Neighborhood
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	Neighborhood
BP	GO:0048827	phyllome development	IEP	Neighborhood
BP	GO:0050793	regulation of developmental process	IEP	Neighborhood
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	Neighborhood
BP	GO:0051252	regulation of RNA metabolic process	IEP	Neighborhood
BP	GO:0051258	protein polymerization	IEP	Neighborhood
BP	GO:0051707	response to other organism	IEP	Neighborhood
BP	GO:0051761	sesquiterpene metabolic process	IEP	Neighborhood
BP	GO:0051762	sesquiterpene biosynthetic process	IEP	Neighborhood
MF	GO:0051993	abscisic acid glucose ester beta-glucosidase activity	IEP	Neighborhood
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	Neighborhood
BP	GO:0060284	regulation of cell development	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0080016	(-)-E-beta-caryophyllene synthase activity	IEP	Neighborhood
MF	GO:0080017	alpha-humulene synthase activity	IEP	Neighborhood
BP	GO:0080027	response to herbivore	IEP	Neighborhood
BP	GO:0080090	regulation of primary metabolic process	IEP	Neighborhood
BP	GO:0080119	ER body organization	IEP	Neighborhood
MF	GO:0080133	midchain alkane hydroxylase activity	IEP	Neighborhood
BP	GO:0080149	sucrose induced translational repression	IEP	Neighborhood
BP	GO:0090626	plant epidermis morphogenesis	IEP	Neighborhood
BP	GO:0090698	post-embryonic plant morphogenesis	IEP	Neighborhood
BP	GO:0090701	specification of plant organ identity	IEP	Neighborhood
MF	GO:0097159	organic cyclic compound binding	IEP	Neighborhood
BP	GO:0099402	plant organ development	IEP	Neighborhood
MF	GO:0140110	transcription regulator activity	IEP	Neighborhood
MF	GO:1901363	heterocyclic compound binding	IEP	Neighborhood
BP	GO:1901421	positive regulation of response to alcohol	IEP	Neighborhood
BP	GO:1901568	fatty acid derivative metabolic process	IEP	Neighborhood
BP	GO:1901570	fatty acid derivative biosynthetic process	IEP	Neighborhood
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	Neighborhood
BP	GO:1905959	positive regulation of cellular response to alcohol	IEP	Neighborhood
BP	GO:2000024	regulation of leaf development	IEP	Neighborhood
BP	GO:2000038	regulation of stomatal complex development	IEP	Neighborhood
BP	GO:2000039	regulation of trichome morphogenesis	IEP	Neighborhood
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	Neighborhood
BP	GO:2000122	negative regulation of stomatal complex development	IEP	Neighborhood
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005519	Acid_phosphat_B-like	43	268

External Links

No external refs found!

AT5G24780 (ATVSP1, VSP1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation