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  5. MA_123150g0010

MA_123150g0010


Description : siRNA-binding factor (AGO2) of non-canonical RdDM pathway


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0002747 (LandPlants) Phylogenetic Tree(s): OG_05_0002747_tree ,
OG_06_0002302 (SeedPlants) Phylogenetic Tree(s): OG_06_0002302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_123150g0010
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.05 Archaeplastida
AT2G27040 AGO4, OCP11 Argonaute family protein 0.02 Archaeplastida
GSVIVT01031430001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Gb_20550 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
Gb_21789 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 Archaeplastida
LOC_Os04g47870.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.02 Archaeplastida
LOC_Os06g39640.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.01 Archaeplastida
MA_10427005g0010 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
MA_10427420g0010 No alias Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10428886g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_158278g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g010970.3.1 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g049500.3.1 No alias siRNA-integrating factor (AGO) 0.01 Archaeplastida
Solyc09g082830.4.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003165 Piwi 586 889
IPR014811 ArgoL1 236 282
IPR003100 PAZ_dom 301 408
IPR032472 ArgoL2 429 475
No external refs found!