MA_123150g0010


Description : siRNA-binding factor (AGO2) of non-canonical RdDM pathway


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0002747 (LandPlants) Phylogenetic Tree(s): OG_05_0002747_tree ,
OG_06_0002302 (SeedPlants) Phylogenetic Tree(s): OG_06_0002302_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_123150g0010
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT1G31290 AGO3 ARGONAUTE 3 0.05 Archaeplastida
AT2G27040 AGO4, OCP11 Argonaute family protein 0.02 Archaeplastida
GSVIVT01031430001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 Archaeplastida
Gb_20550 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
Gb_21789 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.04 Archaeplastida
LOC_Os04g47870.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.02 Archaeplastida
LOC_Os06g39640.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.01 Archaeplastida
MA_10427005g0010 No alias siRNA-binding factor (AGO2) of non-canonical RdDM pathway 0.02 Archaeplastida
MA_10427420g0010 No alias Protein argonaute PNH1 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_10428886g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_158278g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g010970.3.1 No alias Protein argonaute 7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc07g049500.3.1 No alias siRNA-integrating factor (AGO) 0.01 Archaeplastida
Solyc09g082830.4.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003165 Piwi 586 889
IPR014811 ArgoL1 236 282
IPR003100 PAZ_dom 301 408
IPR032472 ArgoL2 429 475
No external refs found!