AT5G25190


Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0001872 (SeedPlants) Phylogenetic Tree(s): OG_06_0001872_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25190

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00111p00113030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Cre08.g364400 No alias No description available 0.01 Archaeplastida
GSVIVT01011465001 No alias External stimuli response.biotic... 0.01 Archaeplastida
GSVIVT01015037001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021098001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031747001 No alias Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.01 Archaeplastida
LOC_Os01g58420.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os03g08500.2 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os05g27930.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os05g34730.1 No alias transcription factor (DREB) 0.01 Archaeplastida
MA_10433094g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_19420g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_24801g0010 No alias transcription factor (ERF) 0.01 Archaeplastida
MA_69434g0020 No alias Ethylene-responsive transcription factor 1 OS=Solanum... 0.01 Archaeplastida
MA_97319g0010 No alias transcription factor (DREB) 0.01 Archaeplastida
Mp7g13760.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Pp3c11_10660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_4250V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.01 Archaeplastida
Solyc03g117230.1.1 No alias Ethylene-responsive transcription factor ERF084... 0.02 Archaeplastida
Solyc04g072900.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g080290.4.1 No alias transcription factor (DREB) 0.01 Archaeplastida
Solyc11g012980.1.1 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
Zm00001e024001_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e029765_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e034242_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e040798_P001 No alias transcription factor (ERF) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity TAS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
BP GO:0009740 gibberellic acid mediated signaling pathway RCA Interproscan
BP GO:0009873 ethylene-activated signaling pathway TAS Interproscan
BP GO:0010162 seed dormancy process RCA Interproscan
Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
CC GO:0000815 ESCRT III complex IEP Neighborhood
MF GO:0001716 L-amino-acid oxidase activity IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0004040 amidase activity IEP Neighborhood
MF GO:0004630 phospholipase D activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004712 protein serine/threonine/tyrosine kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005093 Rab GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005677 chromatin silencing complex IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005798 Golgi-associated vesicle IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006338 chromatin remodeling IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006465 signal peptide processing IEP Neighborhood
BP GO:0006482 protein demethylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006596 polyamine biosynthetic process IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006986 response to unfolded protein IEP Neighborhood
BP GO:0006990 positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008143 poly(A) binding IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008214 protein dealkylation IEP Neighborhood
MF GO:0008734 L-aspartate oxidase activity IEP Neighborhood
MF GO:0008792 arginine decarboxylase activity IEP Neighborhood
MF GO:0008864 formyltetrahydrofolate deformylase activity IEP Neighborhood
BP GO:0009247 glycolipid biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0009378 four-way junction helicase activity IEP Neighborhood
BP GO:0009395 phospholipid catabolic process IEP Neighborhood
BP GO:0009410 response to xenobiotic stimulus IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009435 NAD biosynthetic process IEP Neighborhood
BP GO:0009445 putrescine metabolic process IEP Neighborhood
BP GO:0009446 putrescine biosynthetic process IEP Neighborhood
BP GO:0009608 response to symbiont IEP Neighborhood
BP GO:0009610 response to symbiotic fungus IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009720 detection of hormone stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009726 detection of endogenous stimulus IEP Neighborhood
BP GO:0009729 detection of brassinosteroid stimulus IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009791 post-embryonic development IEP Neighborhood
MF GO:0009927 histidine phosphotransfer kinase activity IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010398 xylogalacturonan metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0015922 aspartate oxidase activity IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
CC GO:0016514 SWI/SNF complex IEP Neighborhood
BP GO:0016577 histone demethylation IEP Neighborhood
CC GO:0016591 RNA polymerase II, holoenzyme IEP Neighborhood
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0016926 protein desumoylation IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
BP GO:0017000 antibiotic biosynthetic process IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
BP GO:0019674 NAD metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
CC GO:0030135 coated vesicle IEP Neighborhood
CC GO:0030136 clathrin-coated vesicle IEP Neighborhood
CC GO:0030140 trans-Golgi network transport vesicle IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP Neighborhood
BP GO:0031056 regulation of histone modification IEP Neighborhood
BP GO:0031058 positive regulation of histone modification IEP Neighborhood
BP GO:0031060 regulation of histone methylation IEP Neighborhood
BP GO:0031062 positive regulation of histone methylation IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0031401 positive regulation of protein modification process IEP Neighborhood
BP GO:0031425 chloroplast RNA processing IEP Neighborhood
MF GO:0031490 chromatin DNA binding IEP Neighborhood
BP GO:0031497 chromatin assembly IEP Neighborhood
BP GO:0031507 heterochromatin assembly IEP Neighborhood
CC GO:0031519 PcG protein complex IEP Neighborhood
BP GO:0032386 regulation of intracellular transport IEP Neighborhood
BP GO:0032388 positive regulation of intracellular transport IEP Neighborhood
MF GO:0032451 demethylase activity IEP Neighborhood
MF GO:0032452 histone demethylase activity IEP Neighborhood
MF GO:0032454 histone demethylase activity (H3-K9 specific) IEP Neighborhood
BP GO:0032776 DNA methylation on cytosine IEP Neighborhood
BP GO:0032922 circadian regulation of gene expression IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033157 regulation of intracellular protein transport IEP Neighborhood
BP GO:0033169 histone H3-K9 demethylation IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034308 primary alcohol metabolic process IEP Neighborhood
BP GO:0034976 response to endoplasmic reticulum stress IEP Neighborhood
MF GO:0035064 methylated histone binding IEP Neighborhood
MF GO:0035252 UDP-xylosyltransferase activity IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
MF GO:0042285 xylosyltransferase activity IEP Neighborhood
BP GO:0042439 ethanolamine-containing compound metabolic process IEP Neighborhood
BP GO:0042631 cellular response to water deprivation IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
MF GO:0043138 3'-5' DNA helicase activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043424 protein histidine kinase binding IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
BP GO:0045596 negative regulation of cell differentiation IEP Neighborhood
BP GO:0045944 positive regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0046653 tetrahydrofolate metabolic process IEP Neighborhood
BP GO:0046822 regulation of nucleocytoplasmic transport IEP Neighborhood
BP GO:0046824 positive regulation of nucleocytoplasmic transport IEP Neighborhood
BP GO:0046825 regulation of protein export from nucleus IEP Neighborhood
BP GO:0046827 positive regulation of protein export from nucleus IEP Neighborhood
MF GO:0047412 N-(long-chain-acyl)ethanolamine deacylase activity IEP Neighborhood
BP GO:0048227 plasma membrane to endosome transport IEP Neighborhood
CC GO:0048471 perinuclear region of cytoplasm IEP Neighborhood
BP GO:0048497 maintenance of floral organ identity IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048587 regulation of short-day photoperiodism, flowering IEP Neighborhood
BP GO:0050665 hydrogen peroxide biosynthetic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051050 positive regulation of transport IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0051188 cofactor biosynthetic process IEP Neighborhood
BP GO:0051222 positive regulation of protein transport IEP Neighborhood
BP GO:0051223 regulation of protein transport IEP Neighborhood
BP GO:0051570 regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0051574 positive regulation of histone H3-K9 methylation IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070076 histone lysine demethylation IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070201 regulation of establishment of protein localization IEP Neighborhood
BP GO:0070291 N-acylethanolamine metabolic process IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
MF GO:0070717 poly-purine tract binding IEP Neighborhood
BP GO:0070828 heterochromatin organization IEP Neighborhood
BP GO:0070887 cellular response to chemical stimulus IEP Neighborhood
BP GO:0070919 production of siRNA involved in chromatin silencing by small RNA IEP Neighborhood
BP GO:0070988 demethylation IEP Neighborhood
BP GO:0071229 cellular response to acid chemical IEP Neighborhood
BP GO:0071365 cellular response to auxin stimulus IEP Neighborhood
BP GO:0071462 cellular response to water stimulus IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0080188 RNA-directed DNA methylation IEP Neighborhood
BP GO:0090087 regulation of peptide transport IEP Neighborhood
BP GO:0090316 positive regulation of intracellular protein transport IEP Neighborhood
BP GO:0090351 seedling development IEP Neighborhood
CC GO:0090568 nuclear transcriptional repressor complex IEP Neighborhood
BP GO:0090700 maintenance of plant organ identity IEP Neighborhood
MF GO:0140030 modification-dependent protein binding IEP Neighborhood
MF GO:0140034 methylation-dependent protein binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1900109 regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1900111 positive regulation of histone H3-K9 dimethylation IEP Neighborhood
BP GO:1900150 regulation of defense response to fungus IEP Neighborhood
BP GO:1901522 positive regulation of transcription from RNA polymerase II promoter involved in cellular response to chemical stimulus IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902347 response to strigolactone IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
BP GO:1903409 reactive oxygen species biosynthetic process IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:1903829 positive regulation of cellular protein localization IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
BP GO:1904951 positive regulation of establishment of protein localization IEP Neighborhood
BP GO:1905269 positive regulation of chromatin organization IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000028 regulation of photoperiodism, flowering IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000072 regulation of defense response to fungus, incompatible interaction IEP Neighborhood
BP GO:2000693 positive regulation of seed maturation IEP Neighborhood
BP GO:2001252 positive regulation of chromosome organization IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 7 56
No external refs found!