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  5. MA_125848g0010

MA_125848g0010


Description : pre-60S subunit nuclear export factor (MRT4)


Gene families : OG0004872 (Archaeplastida) Phylogenetic Tree(s): OG0004872_tree ,
OG_05_0006259 (LandPlants) Phylogenetic Tree(s): OG_05_0006259_tree ,
OG_06_0006637 (SeedPlants) Phylogenetic Tree(s): OG_06_0006637_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_125848g0010
Cluster HCCA: Cluster_473

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00153p00076780 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G25260 No alias Ribosomal protein L10 family protein 0.02 Archaeplastida
LOC_Os11g01420.1 No alias pre-60S subunit nuclear export factor (MRT4) 0.04 Archaeplastida
LOC_Os12g01430.1 No alias pre-60S subunit nuclear export factor (MRT4) 0.04 Archaeplastida
Mp2g07300.1 No alias pre-60S subunit nuclear export factor (MRT4) 0.02 Archaeplastida
Pp3c11_25500V3.1 No alias Ribosomal protein L10 family protein 0.04 Archaeplastida
Pp3s128_30V3.1 No alias Ribosomal protein L10 family protein 0.05 Archaeplastida
Smo164004 No alias No description available 0.02 Archaeplastida
Zm00001e009295_P001 No alias pre-60S subunit nuclear export factor (MRT4) 0.03 Archaeplastida
Zm00001e020823_P001 No alias pre-60S subunit nuclear export factor (MRT4) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0042254 ribosome biogenesis IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
CC GO:0016272 prefoldin complex IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001790 Ribosomal_L10P 10 66
No external refs found!