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  5. MA_126037g0020

MA_126037g0020


Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 489.0)


Gene families : OG0008623 (Archaeplastida) Phylogenetic Tree(s): OG0008623_tree ,
OG_05_0005569 (LandPlants) Phylogenetic Tree(s): OG_05_0005569_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_126037g0020
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT5G40405 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Archaeplastida
GSVIVT01008757001 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 Archaeplastida
MA_926324g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Smo101093 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 162 187
IPR002885 Pentatricopeptide_repeat 262 286
IPR002885 Pentatricopeptide_repeat 188 236
IPR002885 Pentatricopeptide_repeat 86 135
IPR032867 DYW_dom 361 474
IPR002885 Pentatricopeptide_repeat 55 84
IPR002885 Pentatricopeptide_repeat 25 53
No external refs found!