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  5. AT5G25290

AT5G25290


Description : F-box family protein with a domain of unknown function (DUF295)


Gene families : OG0002951 (Archaeplastida) Phylogenetic Tree(s): OG0002951_tree ,
OG_05_0001985 (LandPlants) Phylogenetic Tree(s): OG_05_0001985_tree ,
OG_06_0001108 (SeedPlants) Phylogenetic Tree(s): OG_06_0001108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25290
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.03 Archaeplastida
AT2G03560 No alias F-box family protein with a domain of unknown function (DUF295) 0.06 Archaeplastida
AT2G03610 No alias F-box family protein 0.04 Archaeplastida
AT2G04810 No alias Protein of unknown function (DUF295) 0.12 Archaeplastida
AT2G04830 No alias Protein of unknown function (DUF295) 0.11 Archaeplastida
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.08 Archaeplastida
AT4G10820 No alias F-box family protein 0.04 Archaeplastida
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.09 Archaeplastida
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.11 Archaeplastida
AT4G22170 No alias F-box family protein with a domain of unknown function (DUF295) 0.02 Archaeplastida
AT5G38270 No alias F-box family protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005575 cellular_component ND Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008420 RNA polymerase II CTD heptapeptide repeat phosphatase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0018126 protein hydroxylation IEP Neighborhood
BP GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEP Neighborhood
BP GO:0019471 4-hydroxyproline metabolic process IEP Neighborhood
BP GO:0019511 peptidyl-proline hydroxylation IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0070940 dephosphorylation of RNA polymerase II C-terminal domain IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
InterPro domains Description Start Stop
IPR005174 DUF295 320 374
IPR001810 F-box_dom 13 50
No external refs found!