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Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 130.0)
Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001225 (SeedPlants) Phylogenetic Tree(s): OG_06_0001225_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_126211g0010 | |
| Cluster | HCCA: Cluster_509 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_06048 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Gb_11308 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Gb_22125 | No alias | E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... | 0.03 | Archaeplastida | |
| Gb_30381 | No alias | Probable E3 ubiquitin-protein ligase RHC2A... | 0.05 | Archaeplastida | |
| Smo8109 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | Archaeplastida | |
| Solyc11g010860.3.1 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e003411_P001 | No alias | E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0061630 | ubiquitin protein ligase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0007165 | signal transduction | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| CC | GO:0030684 | preribosome | IEP | Neighborhood |
| CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0033925 | mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity | IEP | Neighborhood |
| MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 422 | 463 |
| No external refs found! |