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  5. MA_126287g0010

MA_126287g0010


Description : RING-H2 finger protein ATL78 OS=Arabidopsis thaliana (sp|q6nqg7|atl78_arath : 116.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0000216 (SeedPlants) Phylogenetic Tree(s): OG_06_0000216_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_126287g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G49200 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.09 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.01 Archaeplastida
LOC_Os02g35144.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_8090362g0010 No alias Acetyl-CoA carboxylase 1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Smo121181 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 115 158
No external refs found!