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  5. AT5G25390

AT5G25390 (SHN2)


Aliases : SHN2

Description : Integrase-type DNA-binding superfamily protein


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0003909 (SeedPlants) Phylogenetic Tree(s): OG_06_0003909_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25390
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00240320 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor FZP OS=Oryza... 0.05 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AMTR_s00089p00102760 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00107p00095070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT1G36060 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G43160 RAP2.6 related to AP2 6 0.03 Archaeplastida
AT1G63030 ddf2 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G72360 HRE1 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G77200 No alias Integrase-type DNA-binding superfamily protein 0.07 Archaeplastida
AT3G14230 RAP2.2 related to AP2 2 0.04 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G27950 CRF4 cytokinin response factor 4 0.04 Archaeplastida
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G32800 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G50080 ERF110 ethylene response factor 110 0.04 Archaeplastida
AT5G64750 ABR1 Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01017542001 No alias Ethylene-responsive transcription factor ERF084... 0.03 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01027770001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01031387001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01036201001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_07474 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.02 Archaeplastida
Gb_08035 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24891 No alias transcription factor (ERF) 0.06 Archaeplastida
Gb_26855 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26857 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26858 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_29220 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_29359 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Gb_32995 No alias Ethylene-responsive transcription factor ERF016... 0.05 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_37188 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g10370.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g10760.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
LOC_Os02g38090.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os02g45420.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g15660.1 No alias Ethylene-responsive transcription factor ERF012... 0.02 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46440.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g52090.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os05g28350.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os05g41780.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g49700.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g08340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g09810.1 No alias Ethylene-responsive transcription factor ERF017... 0.04 Archaeplastida
LOC_Os06g36000.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os06g40150.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
LOC_Os07g22770.1 No alias no description available(sp|a0a3q7i5y9|erfc3_sollc : 90.1) 0.03 Archaeplastida
LOC_Os07g42510.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os07g47790.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os09g11460.1 No alias Ethylene-responsive transcription factor ERF073... 0.05 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
LOC_Os12g41060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_12671g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_15251g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.07 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.08 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_426919g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_54341g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.07 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_647924g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_65877g0010 No alias Dehydration-responsive element-binding protein 3... 0.02 Archaeplastida
MA_66742g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_7960347g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9260020g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.03 Archaeplastida
Mp6g08690.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Pp3c10_17870V3.1 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
Pp3c15_1990V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_1760V3.1 No alias related to AP2 11 0.04 Archaeplastida
Pp3c26_14710V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c5_880V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_20480V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Solyc01g067540.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc01g090560.4.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc02g077840.2.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g095977.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc03g116610.3.1 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.06 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc04g012050.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g072300.1.1 No alias Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.04 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g050830.3.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc05g051180.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc05g051200.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052030.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g066540.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc12g049560.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc12g056590.2.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e003579_P001 No alias Ethylene-responsive transcription factor ERF015... 0.03 Archaeplastida
Zm00001e006139_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e007206_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e019026_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e022864_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e026573_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e029765_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 Archaeplastida
Zm00001e032483_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Zm00001e035811_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e035837_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e037404_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 Archaeplastida
Zm00001e039555_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041815_P001 No alias transcription factor (ERF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
MF GO:0003700 DNA-binding transcription factor activity IDA Interproscan
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003999 adenine phosphoribosyltransferase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0006144 purine nucleobase metabolic process IEP Neighborhood
BP GO:0006168 adenine salvage IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006722 triterpenoid metabolic process IEP Neighborhood
BP GO:0006723 cuticle hydrocarbon biosynthetic process IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008429 phosphatidylethanolamine binding IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009113 purine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010077 maintenance of inflorescence meristem identity IEP Neighborhood
BP GO:0010154 fruit development IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010540 basipetal auxin transport IEP Neighborhood
BP GO:0010541 acropetal auxin transport IEP Neighborhood
BP GO:0010769 regulation of cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
BP GO:0016104 triterpenoid biosynthetic process IEP Neighborhood
BP GO:0016125 sterol metabolic process IEP Neighborhood
BP GO:0016126 sterol biosynthetic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016713 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0019742 pentacyclic triterpenoid metabolic process IEP Neighborhood
BP GO:0019745 pentacyclic triterpenoid biosynthetic process IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0031540 regulation of anthocyanin biosynthetic process IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
BP GO:0040034 regulation of development, heterochronic IEP Neighborhood
MF GO:0042299 lupeol synthase activity IEP Neighborhood
MF GO:0042300 beta-amyrin synthase activity IEP Neighborhood
BP GO:0042335 cuticle development IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
BP GO:0043094 cellular metabolic compound salvage IEP Neighborhood
BP GO:0043096 purine nucleobase salvage IEP Neighborhood
BP GO:0043101 purine-containing compound salvage IEP Neighborhood
BP GO:0043446 cellular alkane metabolic process IEP Neighborhood
BP GO:0043447 alkane biosynthetic process IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
MF GO:0045703 ketoreductase activity IEP Neighborhood
BP GO:0046083 adenine metabolic process IEP Neighborhood
BP GO:0046084 adenine biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
MF GO:0047196 long-chain-alcohol O-fatty-acyltransferase activity IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048481 plant ovule development IEP Neighborhood
BP GO:0048506 regulation of timing of meristematic phase transition IEP Neighborhood
BP GO:0048509 regulation of meristem development IEP Neighborhood
BP GO:0048510 regulation of timing of transition from vegetative to reproductive phase IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
BP GO:0048831 regulation of shoot system development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0060284 regulation of cell development IEP Neighborhood
MF GO:0071771 aldehyde decarbonylase activity IEP Neighborhood
MF GO:0080019 fatty-acyl-CoA reductase (alcohol-forming) activity IEP Neighborhood
MF GO:0080133 midchain alkane hydroxylase activity IEP Neighborhood
MF GO:0106130 purine phosphoribosyltransferase activity IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:2000024 regulation of leaf development IEP Neighborhood
BP GO:2000039 regulation of trichome morphogenesis IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 48
No external refs found!