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MA_126866g0010


Description : Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica (sp|q5jl96|zfp34_orysj : 350.0)


Gene families : OG0001478 (Archaeplastida) Phylogenetic Tree(s): OG0001478_tree ,
OG_05_0001122 (LandPlants) Phylogenetic Tree(s): OG_05_0001122_tree ,
OG_06_0000963 (SeedPlants) Phylogenetic Tree(s): OG_06_0000963_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_126866g0010
Cluster HCCA: Cluster_237

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00142p00031670 evm_27.TU.AmTr_v1... Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 Archaeplastida
AT5G18650 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.03 Archaeplastida
AT5G22920 No alias CHY-type/CTCHY-type/RING-type Zinc finger protein 0.06 Archaeplastida
GSVIVT01031467001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01033674001 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01035743001 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.02 Archaeplastida
LOC_Os03g22680.1 No alias E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os10g31850.1 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.04 Archaeplastida
Smo78412 No alias Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza... 0.04 Archaeplastida
Zm00001e004657_P008 No alias E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009092 homoserine metabolic process IEP Neighborhood
BP GO:0019346 transsulfuration IEP Neighborhood
BP GO:0050667 homocysteine metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR027370 Znf-RING_LisH 182 222
IPR008913 Znf_CHY 46 127
No external refs found!