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  5. MA_12709g0010

MA_12709g0010


Description : TOM endomembrane trafficking associated protein


Gene families : OG0000369 (Archaeplastida) Phylogenetic Tree(s): OG0000369_tree ,
OG_05_0000606 (LandPlants) Phylogenetic Tree(s): OG_05_0000606_tree ,
OG_06_0001299 (SeedPlants) Phylogenetic Tree(s): OG_06_0001299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12709g0010
Cluster HCCA: Cluster_447

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00032430 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
GSVIVT01030233001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida
Gb_06800 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
LOC_Os01g12880.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
LOC_Os05g39760.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
LOC_Os10g42724.1 No alias TOM endomembrane trafficking associated protein 0.05 Archaeplastida
LOC_Os11g09329.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Smo39145 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.03 Archaeplastida
Smo67275 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.02 Archaeplastida
Solyc03g097070.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc04g063280.3.1 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida
Solyc08g068370.3.1 No alias TOM endomembrane trafficking associated protein 0.02 Archaeplastida
Solyc09g014790.4.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Solyc09g025240.3.1 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Zm00001e014210_P001 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Zm00001e016401_P001 No alias TOM endomembrane trafficking associated protein 0.03 Archaeplastida
Zm00001e026110_P002 No alias TOM endomembrane trafficking associated protein 0.05 Archaeplastida
Zm00001e037022_P001 No alias TOM endomembrane trafficking associated protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR002014 VHS_dom 57 173
IPR004152 GAT_dom 239 312
No external refs found!