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  5. MA_12730g0010

MA_12730g0010


Description : Pentatricopeptide repeat-containing protein At5g55840 OS=Arabidopsis thaliana (sp|q9lvq5|pp432_arath : 458.0)


Gene families : OG0001630 (Archaeplastida) Phylogenetic Tree(s): OG0001630_tree ,
OG_05_0001046 (LandPlants) Phylogenetic Tree(s): OG_05_0001046_tree ,
OG_06_0000527 (SeedPlants) Phylogenetic Tree(s): OG_06_0000527_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12730g0010
Cluster HCCA: Cluster_512

Target Alias Description ECC score Gene Family Method Actions
MA_623581g0020 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.06 Archaeplastida
MA_68479g0010 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 798 830
IPR002885 Pentatricopeptide_repeat 483 515
IPR002885 Pentatricopeptide_repeat 693 725
IPR002885 Pentatricopeptide_repeat 589 620
IPR002885 Pentatricopeptide_repeat 241 271
IPR002885 Pentatricopeptide_repeat 133 166
IPR002885 Pentatricopeptide_repeat 417 466
IPR002885 Pentatricopeptide_repeat 837 886
IPR002885 Pentatricopeptide_repeat 733 781
IPR002885 Pentatricopeptide_repeat 628 676
IPR002885 Pentatricopeptide_repeat 67 116
IPR002885 Pentatricopeptide_repeat 347 396
IPR002885 Pentatricopeptide_repeat 277 326
IPR002885 Pentatricopeptide_repeat 522 571
IPR002885 Pentatricopeptide_repeat 172 221
No external refs found!