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  5. MA_127335g0010

MA_127335g0010


Description : cyclin (CYCB)


Gene families : OG0000492 (Archaeplastida) Phylogenetic Tree(s): OG0000492_tree ,
OG_05_0000357 (LandPlants) Phylogenetic Tree(s): OG_05_0000357_tree ,
OG_06_0002131 (SeedPlants) Phylogenetic Tree(s): OG_06_0002131_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_127335g0010
Cluster HCCA: Cluster_379

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00032080 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.08 Archaeplastida
AMTR_s00101p00131830 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
AT1G16330 CYCB3;1 cyclin b3;1 0.03 Archaeplastida
AT1G20610 CYCB2;3 Cyclin B2;3 0.04 Archaeplastida
AT1G76310 CYCB2;4 CYCLIN B2;4 0.05 Archaeplastida
AT2G26760 CYCB1;4 Cyclin B1;4 0.06 Archaeplastida
AT3G11520 CYCB1;3, CYC2 CYCLIN B1;3 0.07 Archaeplastida
AT4G35620 CYCB2;2 Cyclin B2;2 0.06 Archaeplastida
Cpa|evm.model.tig00000769.38 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
GSVIVT01009895001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.06 Archaeplastida
GSVIVT01025781001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.08 Archaeplastida
GSVIVT01032782001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.07 Archaeplastida
GSVIVT01036739001 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.03 Archaeplastida
Gb_01761 No alias cyclin (CYCB) 0.05 Archaeplastida
Gb_03506 No alias cyclin (CYCB) 0.06 Archaeplastida
Gb_10664 No alias cyclin (CYCB) 0.06 Archaeplastida
Gb_27795 No alias G2/mitotic-specific cyclin-1 OS=Antirrhinum majus... 0.08 Archaeplastida
LOC_Os01g59120.1 No alias cyclin (CYCB) 0.06 Archaeplastida
LOC_Os04g47580.1 No alias cyclin (CYCB) 0.05 Archaeplastida
LOC_Os05g41390.1 No alias cyclin (CYCB) 0.06 Archaeplastida
LOC_Os06g51110.2 No alias cyclin (CYCB) 0.07 Archaeplastida
MA_10314137g0010 No alias Cyclin-B1-5 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Mp2g00590.1 No alias cyclin (CYCB) 0.03 Archaeplastida
Mp5g10030.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Pp3c15_21520V3.1 No alias CYCLIN B2;4 0.07 Archaeplastida
Pp3c9_18910V3.1 No alias CYCLIN B2;4 0.08 Archaeplastida
Smo230742 No alias Cell cycle.regulation.cyclins.CYCB-type cyclin 0.05 Archaeplastida
Solyc01g009040.4.1 No alias cyclin (CYCB) 0.07 Archaeplastida
Solyc02g082820.3.1 No alias cyclin (CYCB) 0.04 Archaeplastida
Solyc03g032190.3.1 No alias cyclin (CYCB) 0.06 Archaeplastida
Solyc07g066660.4.1 No alias cyclin (CYCB) 0.06 Archaeplastida
Solyc10g078330.2.1 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e007244_P001 No alias cyclin (CYCB) 0.08 Archaeplastida
Zm00001e019528_P002 No alias cyclin (CYCB) 0.02 Archaeplastida
Zm00001e028899_P002 No alias cyclin (CYCB) 0.08 Archaeplastida
Zm00001e030146_P001 No alias cyclin (CYCB) 0.05 Archaeplastida
Zm00001e041485_P001 No alias cyclin (CYCB) 0.1 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 260 387
IPR004367 Cyclin_C-dom 389 505
No external refs found!