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  5. AT5G25600

AT5G25600


Description : BEST Arabidopsis thaliana protein match is: nucleic acid binding;zinc ion binding (TAIR:AT5G36228.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).


Gene families : OG0005094 (Archaeplastida) Phylogenetic Tree(s): OG0005094_tree ,
OG_05_0003489 (LandPlants) Phylogenetic Tree(s): OG_05_0003489_tree ,
OG_06_0002163 (SeedPlants) Phylogenetic Tree(s): OG_06_0002163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25600
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT5G40595 No alias unknown protein; Has 30201 Blast hits to 17322 proteins... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
BP GO:0006560 proline metabolic process IEP Neighborhood
BP GO:0006561 proline biosynthetic process IEP Neighborhood
BP GO:0006817 phosphate ion transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009408 response to heat IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009644 response to high light intensity IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009688 abscisic acid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009939 positive regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009967 positive regulation of signal transduction IEP Neighborhood
BP GO:0009968 negative regulation of signal transduction IEP Neighborhood
BP GO:0010029 regulation of seed germination IEP Neighborhood
BP GO:0010030 positive regulation of seed germination IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010109 regulation of photosynthesis IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010150 leaf senescence IEP Neighborhood
BP GO:0010205 photoinhibition IEP Neighborhood
MF GO:0010436 carotenoid dioxygenase activity IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010648 negative regulation of cell communication IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0017084 delta1-pyrroline-5-carboxylate synthetase activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0023056 positive regulation of signaling IEP Neighborhood
BP GO:0023057 negative regulation of signaling IEP Neighborhood
CC GO:0033106 cis-Golgi network membrane IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042548 regulation of photosynthesis, light reaction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:0043155 negative regulation of photosynthesis, light reaction IEP Neighborhood
BP GO:0043289 apocarotenoid biosynthetic process IEP Neighborhood
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Neighborhood
MF GO:0045549 9-cis-epoxycarotenoid dioxygenase activity IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0048580 regulation of post-embryonic development IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0048585 negative regulation of response to stimulus IEP Neighborhood
BP GO:0048838 release of seed from dormancy IEP Neighborhood
MF GO:0050403 trans-zeatin O-beta-D-glucosyltransferase activity IEP Neighborhood
MF GO:0050502 cis-zeatin O-beta-D-glucosyltransferase activity IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
BP GO:0090693 plant organ senescence IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
BP GO:0097438 exit from dormancy IEP Neighborhood
BP GO:1900140 regulation of seedling development IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902039 negative regulation of seed dormancy process IEP Neighborhood
BP GO:1902456 regulation of stomatal opening IEP Neighborhood
BP GO:1902645 tertiary alcohol biosynthetic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1905156 negative regulation of photosynthesis IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
BP GO:2000033 regulation of seed dormancy process IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000692 negative regulation of seed maturation IEP Neighborhood
InterPro domains Description Start Stop
IPR025558 DUF4283 35 169
No external refs found!