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  5. MA_12866g0010

MA_12866g0010


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_12866g0010
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT2G46680 HB-7, ATHB-7, ATHB7 homeobox 7 0.02 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.06 Archaeplastida
AT4G36740 ATHB40, HB40, HB-5 homeobox protein 40 0.03 Archaeplastida
Gb_04698 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Gb_20878 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
Pp3c12_21760V3.1 No alias homeobox protein 16 0.03 Archaeplastida
Pp3c6_2730V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Smo18217 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Solyc03g082550.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e023458_P003 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Zm00001e034785_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e038901_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 50 100
No external refs found!