Description : histone (H2B)
Gene families : OG0000585 (Archaeplastida) Phylogenetic Tree(s): OG0000585_tree ,
OG_05_0000341 (LandPlants) Phylogenetic Tree(s): OG_05_0000341_tree ,
OG_06_0000197 (SeedPlants) Phylogenetic Tree(s): OG_06_0000197_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_12940g0010 | |
Cluster | HCCA: Cluster_356 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00007p00158970 | evm_27.TU.AmTr_v1... | Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
AMTR_s00065p00110200 | evm_27.TU.AmTr_v1... | Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
AMTR_s00078p00164770 | evm_27.TU.AmTr_v1... | Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana | 0.05 | Archaeplastida | |
AT1G07160 | No alias | Protein phosphatase 2C family protein | 0.03 | Archaeplastida | |
AT2G30020 | No alias | Protein phosphatase 2C family protein | 0.03 | Archaeplastida | |
GSVIVT01024710001 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
GSVIVT01036289001 | No alias | Probable protein phosphatase 2C 74 OS=Oryza sativa... | 0.06 | Archaeplastida | |
LOC_Os03g18150.1 | No alias | Probable protein phosphatase 2C 32 OS=Oryza sativa... | 0.04 | Archaeplastida | |
MA_10430806g0010 | No alias | Probable protein phosphatase 2C 2 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_10430806g0020 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.09 | Archaeplastida | |
MA_10431799g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_10432464g0010 | No alias | Probable protein phosphatase 2C 2 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_10437164g0010 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
MA_1114215g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_1136663g0010 | No alias | No annotation | 0.05 | Archaeplastida | |
MA_1274g0010 | No alias | Probable protein phosphatase 2C 2 OS=Arabidopsis... | 0.06 | Archaeplastida | |
MA_128174g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_134564g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_183946g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.07 | Archaeplastida | |
MA_185569g0010 | No alias | histone (H2B) | 0.04 | Archaeplastida | |
MA_223907g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_749790g0010 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
MA_77486g0010 | No alias | Probable protein phosphatase 2C 2 OS=Arabidopsis... | 0.03 | Archaeplastida | |
MA_8168716g0010 | No alias | Probable protein phosphatase 2C 30 OS=Arabidopsis... | 0.05 | Archaeplastida | |
MA_8182812g0010 | No alias | Probable protein phosphatase 2C 30 OS=Arabidopsis... | 0.04 | Archaeplastida | |
MA_9276147g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_9664807g0010 | No alias | Probable protein phosphatase 2C 25 OS=Arabidopsis... | 0.06 | Archaeplastida | |
Mp6g11540.1 | No alias | clade B phosphatase | 0.04 | Archaeplastida | |
Solyc05g052520.3.1 | No alias | Probable protein phosphatase 2C 30 OS=Arabidopsis... | 0.04 | Archaeplastida | |
Solyc06g007190.4.1 | No alias | Probable protein phosphatase 2C 2 OS=Arabidopsis... | 0.08 | Archaeplastida | |
Zm00001e011044_P001 | No alias | Probable protein phosphatase 2C 74 OS=Oryza sativa... | 0.02 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEA | Interproscan |
MF | GO:0003677 | DNA binding | IEA | Interproscan |
MF | GO:0003824 | catalytic activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000166 | nucleotide binding | IEP | Neighborhood |
MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
MF | GO:0036094 | small molecule binding | IEP | Neighborhood |
MF | GO:0043168 | anion binding | IEP | Neighborhood |
MF | GO:0043531 | ADP binding | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
MF | GO:1901265 | nucleoside phosphate binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No external refs found! |