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  5. AT5G25850

AT5G25850


Description : F-box/RNI-like/FBD-like domains-containing protein


Gene families : OG0001957 (Archaeplastida) Phylogenetic Tree(s): OG0001957_tree ,
OG_05_0001277 (LandPlants) Phylogenetic Tree(s): OG_05_0001277_tree ,
OG_06_0000660 (SeedPlants) Phylogenetic Tree(s): OG_06_0000660_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT5G25850
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G32020 No alias F-box family protein 0.08 Archaeplastida
AT1G60400 No alias F-box/RNI-like superfamily protein 0.08 Archaeplastida
AT1G66320 No alias F-box/RNI-like superfamily protein 0.04 Archaeplastida
AT1G78760 No alias F-box/RNI-like superfamily protein 0.05 Archaeplastida
AT3G23955 No alias F-box family protein 0.05 Archaeplastida
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.04 Archaeplastida
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 Archaeplastida
AT5G22720 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 Archaeplastida
AT5G44940 No alias F-box/RNI-like superfamily protein 0.09 Archaeplastida
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.1 Archaeplastida
AT5G53637 No alias No description available 0.05 Archaeplastida
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.11 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0015695 organic cation transport IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0072488 ammonium transmembrane transport IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 22 60
IPR013101 Leu-rich_rpt_2 164 189
IPR006566 FBD 405 450
No external refs found!