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  5. MA_13061g0010

MA_13061g0010


Description : no hits & (original description: none)


Gene families : OG0001895 (Archaeplastida) Phylogenetic Tree(s): OG0001895_tree ,
OG_05_0001910 (LandPlants) Phylogenetic Tree(s): OG_05_0001910_tree ,
OG_06_0001734 (SeedPlants) Phylogenetic Tree(s): OG_06_0001734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_13061g0010
Cluster HCCA: Cluster_519

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00235910 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G33680 No alias KH domain-containing protein 0.05 Archaeplastida
AT2G25970 No alias KH domain-containing protein 0.06 Archaeplastida
Cre06.g250800 No alias No description available 0.03 Archaeplastida
GSVIVT01036378001 No alias No description available 0.04 Archaeplastida
Gb_04922 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_17340 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_31122 No alias Protein BTR1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g13130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g01930.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c7_11410V3.1 No alias KH domain-containing protein 0.02 Archaeplastida
Smo437890 No alias Protein BTR1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc11g040370.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e014452_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e021868_P005 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024927_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e029163_P001 No alias no hits & (original description: none) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 265 332
IPR004088 KH_dom_type_1 172 237
No external refs found!