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Description : methylation reader (ECT)
Gene families : OG0000387 (Archaeplastida) Phylogenetic Tree(s): OG0000387_tree ,
OG_05_0000366 (LandPlants) Phylogenetic Tree(s): OG_05_0000366_tree ,
OG_06_0003902 (SeedPlants) Phylogenetic Tree(s): OG_06_0003902_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_130754g0010 | |
| Cluster | HCCA: Cluster_393 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00073360 | evm_27.TU.AmTr_v1... | No description available | 0.02 | Archaeplastida | |
| AT3G13460 | ECT2 | evolutionarily conserved C-terminal region 2 | 0.03 | Archaeplastida | |
| GSVIVT01017649001 | No alias | No description available | 0.07 | Archaeplastida | |
| GSVIVT01032236001 | No alias | No description available | 0.03 | Archaeplastida | |
| GSVIVT01033395001 | No alias | No description available | 0.05 | Archaeplastida | |
| Gb_34757 | No alias | methylation reader (ECT) | 0.04 | Archaeplastida | |
| Gb_38284 | No alias | methylation reader (ECT) | 0.06 | Archaeplastida | |
| LOC_Os03g06240.1 | No alias | methylation reader (ECT) | 0.02 | Archaeplastida | |
| LOC_Os07g07490.1 | No alias | methylation reader (ECT) | 0.02 | Archaeplastida | |
| Pp3c3_33560V3.1 | No alias | evolutionarily conserved C-terminal region 5 | 0.02 | Archaeplastida | |
| Solyc05g032850.3.1 | No alias | methylation reader (ECT) | 0.04 | Archaeplastida | |
| Solyc12g099090.3.1 | No alias | methylation reader (ECT) | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
| MF | GO:0003729 | mRNA binding | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0004527 | exonuclease activity | IEP | Neighborhood |
| CC | GO:0005667 | transcription factor complex | IEP | Neighborhood |
| CC | GO:0005669 | transcription factor TFIID complex | IEP | Neighborhood |
| CC | GO:0005685 | U1 snRNP | IEP | Neighborhood |
| BP | GO:0006352 | DNA-templated transcription, initiation | IEP | Neighborhood |
| BP | GO:0006376 | mRNA splice site selection | IEP | Neighborhood |
| MF | GO:0008641 | ubiquitin-like modifier activating enzyme activity | IEP | Neighborhood |
| MF | GO:0016877 | ligase activity, forming carbon-sulfur bonds | IEP | Neighborhood |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
| CC | GO:0044798 | nuclear transcription factor complex | IEP | Neighborhood |
| CC | GO:0090575 | RNA polymerase II transcription factor complex | IEP | Neighborhood |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | Neighborhood |
| CC | GO:0120114 | Sm-like protein family complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR007275 | YTH_domain | 429 | 566 |
| No external refs found! |