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Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 451.0)
Gene families : OG0011622 (Archaeplastida) Phylogenetic Tree(s): OG0011622_tree ,
OG_05_0092705 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0073565 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_131610g0010 | |
| Cluster | HCCA: Cluster_198 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Gb_38568 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.25 | Archaeplastida | |
| MA_40413g0010 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | Archaeplastida | |
| Smo129427 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.01 | Archaeplastida | |
| Zm00001e007988_P001 | No alias | Pentatricopeptide repeat-containing protein At1g09900... | 0.05 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
| MF | GO:0043169 | cation binding | IEP | Neighborhood |
| MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
| MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 339 | 365 |
| IPR002885 | Pentatricopeptide_repeat | 207 | 233 |
| IPR002885 | Pentatricopeptide_repeat | 367 | 397 |
| IPR002885 | Pentatricopeptide_repeat | 235 | 263 |
| IPR002885 | Pentatricopeptide_repeat | 43 | 60 |
| IPR002885 | Pentatricopeptide_repeat | 602 | 626 |
| IPR002885 | Pentatricopeptide_repeat | 264 | 309 |
| IPR002885 | Pentatricopeptide_repeat | 427 | 475 |
| IPR002885 | Pentatricopeptide_repeat | 528 | 576 |
| IPR002885 | Pentatricopeptide_repeat | 132 | 178 |
| No external refs found! |