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Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_133455g0010 | |
| Cluster | HCCA: Cluster_541 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| LOC_Os02g36924.1 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| LOC_Os03g03100.1 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| LOC_Os06g11330.1 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_113509g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_128164g0010 | No alias | No annotation | 0.03 | Archaeplastida | |
| MA_15122g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_16120g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_175522g0010 | No alias | transcription factor (MADS/AGL) | 0.05 | Archaeplastida | |
| MA_254338g0010 | No alias | transcription factor (MADS/AGL) | 0.08 | Archaeplastida | |
| MA_35712g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| MA_6279308g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_95674g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| Solyc01g106170.4.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc03g006830.3.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc04g076280.4.1 | No alias | MADS-box protein SVP OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
| Solyc08g080100.4.1 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |