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  5. MA_135501g0010

MA_135501g0010


Description : Putative pentatricopeptide repeat-containing protein At2g01510 OS=Arabidopsis thaliana (sp|q9s7f4|pp206_arath : 516.0)


Gene families : OG0012195 (Archaeplastida) Phylogenetic Tree(s): OG0012195_tree ,
OG_05_0017487 (LandPlants) Phylogenetic Tree(s): OG_05_0017487_tree ,
OG_06_0020042 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_135501g0010
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
Gb_02413 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
Gb_32432 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 186 233
IPR002885 Pentatricopeptide_repeat 557 604
IPR002885 Pentatricopeptide_repeat 287 334
IPR002885 Pentatricopeptide_repeat 388 435
IPR002885 Pentatricopeptide_repeat 127 156
IPR002885 Pentatricopeptide_repeat 697 726
IPR002885 Pentatricopeptide_repeat 157 185
IPR002885 Pentatricopeptide_repeat 491 506
IPR002885 Pentatricopeptide_repeat 362 387
IPR002885 Pentatricopeptide_repeat 463 486
IPR002885 Pentatricopeptide_repeat 632 654
IPR032867 DYW_dom 730 781
No external refs found!