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  5. MA_136209g0010

MA_136209g0010


Description : histone demethylase (KDM3). transcription factor (JUMONJI)


Gene families : OG0000515 (Archaeplastida) Phylogenetic Tree(s): OG0000515_tree ,
OG_05_0010481 (LandPlants) Phylogenetic Tree(s): OG_05_0010481_tree ,
OG_06_0011258 (SeedPlants) Phylogenetic Tree(s): OG_06_0011258_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_136209g0010
Cluster HCCA: Cluster_435

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00058780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.04 Archaeplastida
AT4G00990 No alias Transcription factor jumonji (jmjC) domain-containing protein 0.02 Archaeplastida
GSVIVT01027160001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.03 Archaeplastida
GSVIVT01031115001 No alias Lysine-specific demethylase JMJ25 OS=Arabidopsis thaliana 0.02 Archaeplastida
LOC_Os03g31594.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.06 Archaeplastida
MA_8576373g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c4_21970V3.1 No alias transcription factor jumonji (jmjC) domain-containing protein 0.02 Archaeplastida
Solyc02g078790.4.1 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.07 Archaeplastida
Zm00001e025393_P001 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.06 Archaeplastida
Zm00001e038213_P003 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003347 JmjC_dom 250 339
No external refs found!